BCSCDB: Biomarkers of Cancer Stem Cells Database
Number of entries related to SKBR7 cell line is 63
| GENE | HGNC_ID | MARKER_TYPE | CANCER_TYPE | HISTOLOGICAL_TYPE | CELL_LINE | CSC_ENRICHMENT | METHOD | EXPRESSION_LEVEL | CONFIDENCE_SCORING | GLOBAL_SCORING | PUBMED_ID |
|---|---|---|---|---|---|---|---|---|---|---|---|
| ALDH1A1 | 402 | LTM | Breast Cancer | Carcinoma | SKBR7 | NA | ALDEFLUOR assay | NA | 0.12 | 0.684 | 19190339 |
| ALG5 | 20266 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0011 | 19190339 |
| ARID1B | 18040 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0011 | 19190339 |
| ASTE1 | 25021 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0011 | 19190339 |
| ATP5MF | 848 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0021 | 19190339 |
| CAMK2B | 1461 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0021 | 19190339 |
| CCDC138 | 26531 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0011 | 19190339 |
| CCNL1 | 20569 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0011 | 19190339 |
| CD300LB | 30811 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0011 | 19190339 |
| CHCHD8 | 24604 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0011 | 19190339 |
| CHURC1 | 20099 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0011 | 19190339 |
| CLIC5 | 13517 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0021 | 19190339 |
| CMC1 | 28783 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0011 | 19190339 |
| COL11A2 | 2187 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0021 | 19190339 |
| COMMD6 | 24015 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0011 | 19190339 |
| DC2 | 24448 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0011 | 19190339 |
| DCTPP1 | 28777 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0021 | 19190339 |
| DMACs2L | 18799 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0021 | 19190339 |
| DNAJC19 | 30528 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0021 | 19190339 |
| EIF3S9 | 3280 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0011 | 19190339 |
| EPPK1 | 15577 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0042 | 19190339 |
| FAM49B | 25216 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0021 | 19190339 |
| FBXL18 | 21874 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0021 | 19190339 |
| GART | 4163 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0064 | 19190339 |
| GIPC3 | 18183 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0011 | 19190339 |
| IMMP1L | 26317 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0011 | 19190339 |
| ISCA1 | 28660 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0011 | 19190339 |
| KLK3 | 6364 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0021 | 19190339 |
| LSM3 | 17874 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0011 | 19190339 |
| MRPL41 | 14492 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0011 | 19190339 |
| MRPL42 | 14493 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0011 | 19190339 |
| MRPL47 | 16652 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0021 | 19190339 |
| MRPL54 | 16685 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0011 | 19190339 |
| MRPS23 | 14509 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0011 | 19190339 |
| NACA | 7629 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0011 | 19190339 |
| NDUFA2 | 7685 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0011 | 19190339 |
| NUP37 | 29929 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0011 | 19190339 |
| PCNX1 | 19740 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0011 | 19190339 |
| PDCD10 | 8761 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0011 | 19190339 |
| PDCD5 | 8764 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0021 | 19190339 |
| PNPLA2 | 30802 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0021 | 19190339 |
| PRPF39 | 20314 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0011 | 19190339 |
| PRPF4B | 17346 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0011 | 19190339 |
| PSORS1C2 | 17199 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0011 | 19190339 |
| RAD51B | 9822 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0011 | 19190339 |
| RBIS | 32235 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0011 | 19190339 |
| RBM15 | 14959 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0011 | 19190339 |
| RMDN1 | 24285 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0011 | 19190339 |
| RNF7 | 10070 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0021 | 19190339 |
| SLC38A2 | 13448 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0021 | 19190339 |
| SNORD50A | 10200 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0011 | 19190339 |
| SRSF7 | 10789 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0021 | 19190339 |
| ST3GAL3 | 10866 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0011 | 19190339 |
| TAS2R14 | 14920 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0032 | 19190339 |
| TMEM141 | 28211 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0021 | 19190339 |
| TPRXL | 32178 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0011 | 19190339 |
| TYW5 | 26754 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0011 | 19190339 |
| UBL5 | 13736 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0011 | 19190339 |
| UGGT1 | 15663 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0021 | 19190339 |
| USP15 | 12613 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0011 | 19190339 |
| WDR53 | 28786 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0011 | 19190339 |
| WWOX | 12799 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0011 | 19190339 |
| ZFP41 | 26786 | HTM | Breast Cancer | Carcinoma | SKBR7 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0021 | 19190339 |