BCSCDB: Biomarkers of Cancer Stem Cells Database
Number of entries related to SNU5 cell line is 62
| GENE | HGNC_ID | MARKER_TYPE | CANCER_TYPE | HISTOLOGICAL_TYPE | CELL_LINE | CSC_ENRICHMENT | METHOD | EXPRESSION_LEVEL | CONFIDENCE_SCORING | GLOBAL_SCORING | PUBMED_ID |
|---|---|---|---|---|---|---|---|---|---|---|---|
| CD44 | 1681 | LTM | Gastric Cancer | Carcinoma | SNU5 | NA | FACs and SFA followed by RT-PCR and Western Blotting | NA | 0.6 | 1 | 28440445 |
| CD44 | 1681 | LTM | Gastric Cancer | Carcinoma | SNU5 | NA | FACs followed by SFA and Western Blotting | NA | 0.6 | 1 | 33798550 |
| CD44 | 1681 | LTM | Gastric Cancer | Carcinoma | SNU5 | NA | FACs | NA | 0.6 | 1 | 32661467 |
| CD44 | 1681 | LTM | Gastric Cancer | Carcinoma | SNU5 | NA | FACs followed by SFA | NA | 0.6 | 1 | 31073886 |
| NANOG | 20857 | LTM | Gastric Cancer | Carcinoma | SNU5 | NA | FACs for CSC marker followed by Western Blotting and qRT-PCR | NA | 0.48 | 0.5461 | 33798550 |
| NANOG | 20857 | LTM | Gastric Cancer | Carcinoma | SNU5 | NA | SFA followed by RT-PCR and Western Blotting | NA | 0.48 | 0.5461 | 28440445 |
| NANOG | 20857 | LTM | Gastric Cancer | Carcinoma | SNU5 | NA | RT-PCR followed by SFA | NA | 0.48 | 0.5461 | 31073886 |
| POU5F1 | 9221 | LTM | Gastric Cancer | Carcinoma | SNU5 | NA | FACs for CSC marker followed by Western Blotting and qRT-PCR | NA | 0.48 | 0.6448 | 33798550 |
| POU5F1 | 9221 | LTM | Gastric Cancer | Carcinoma | SNU5 | NA | SFA followed by RT-PCR and Western Blotting | NA | 0.48 | 0.6448 | 28440445 |
| POU5F1 | 9221 | LTM | Gastric Cancer | Carcinoma | SNU5 | NA | RT-PCR followed by SFA | NA | 0.48 | 0.6448 | 31073886 |
| SOX2 | 11195 | LTM | Gastric Cancer | Carcinoma | SNU5 | NA | FACs for CSC marker followed by Western Blotting and qRT-PCR | NA | 0.48 | 0.5695 | 33798550 |
| SOX2 | 11195 | LTM | Gastric Cancer | Carcinoma | SNU5 | NA | SFA followed by RT-PCR and Western Blotting | NA | 0.48 | 0.5695 | 28440445 |
| SOX2 | 11195 | LTM | Gastric Cancer | Carcinoma | SNU5 | NA | RT-PCR followed by SFA | NA | 0.48 | 0.5695 | 31073886 |
| MIR98 | 31649 | HTM/LTM | Gastric Cancer | Carcinoma | SNU5 | NA | FACs for CSC marker followed by Transcriptomics and qRT-PCR | Down | 0.24 | 0.0021 | 33798550 |
| EPCAM | 11529 | LTM | Gastric Cancer | Carcinoma | SNU5 | NA | FACs followed by SFA | NA | 0.12 | 0.211 | 31073886 |
| PROM1 | 9454 | LTM | Gastric Cancer | Carcinoma | SNU5 | NA | FACs followed by SFA | NA | 0.12 | 0.7582 | 31073886 |
| THY1 | 11801 | LTM | Gastric Cancer | Carcinoma | SNU5 | NA | FACs | NA | 0.12 | 0.0371 | 32661467 |
| THY1 | 11801 | LTM | Gastric Cancer | Carcinoma | SNU5 | NA | FACs followed by SFA | NA | 0.12 | 0.0371 | 31073886 |
| MIR1185-1 | 35257 | HTM | Gastric Cancer | Carcinoma | SNU5 | NA | FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0021 | 33798550 |
| MIR1185-1 | 35257 | HTM | Gastric Cancer | Carcinoma | SNU5 | NA | FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0021 | 32661467 |
| MIR122 | 31501 | HTM | Gastric Cancer | Carcinoma | SNU5 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0042 | 32661467 |
| MIR125A | 31505 | HTM | Gastric Cancer | Carcinoma | SNU5 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0032 | 32661467 |
| MIR139 | 31526 | HTM | Gastric Cancer | Carcinoma | SNU5 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0032 | 32661467 |
| MIR151B | 41588 | HTM | Gastric Cancer | Carcinoma | SNU5 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0021 | 32661467 |
| MIR15B | 31544 | HTM | Gastric Cancer | Carcinoma | SNU5 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0085 | 32661467 |
| MIR181D | 32089 | HTM | Gastric Cancer | Carcinoma | SNU5 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0032 | 32661467 |
| MIR1910 | 35394 | HTM | Gastric Cancer | Carcinoma | SNU5 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0021 | 32661467 |
| MIR195 | 31566 | HTM | Gastric Cancer | Carcinoma | SNU5 | NA | FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0032 | 33798550 |
| MIR196A1 | 31567 | HTM | Gastric Cancer | Carcinoma | SNU5 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0021 | 32661467 |
| MIR23C | 38913 | HTM | Gastric Cancer | Carcinoma | SNU5 | NA | FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0032 | 33798550 |
| MIR30A | 31624 | HTM | Gastric Cancer | Carcinoma | SNU5 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0085 | 32661467 |
| MIR30A | 31624 | HTM | Gastric Cancer | Carcinoma | SNU5 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0085 | 32661467 |
| MIR30B | 31625 | HTM | Gastric Cancer | Carcinoma | SNU5 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0053 | 32661467 |
| MIR30C1 | 31626 | HTM | Gastric Cancer | Carcinoma | SNU5 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0042 | 32661467 |
| MIR3613 | 38964 | HTM | Gastric Cancer | Carcinoma | SNU5 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0011 | 32661467 |
| MIR378A | 31871 | HTM | Gastric Cancer | Carcinoma | SNU5 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0053 | 32661467 |
| MIR3911 | 38962 | HTM | Gastric Cancer | Carcinoma | SNU5 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0011 | 32661467 |
| MIR424 | 31881 | HTM | Gastric Cancer | Carcinoma | SNU5 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0064 | 32661467 |
| MIR4286 | 38186 | HTM | Gastric Cancer | Carcinoma | SNU5 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0032 | 32661467 |
| MIR4417 | 41535 | HTM | Gastric Cancer | Carcinoma | SNU5 | NA | FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0011 | 32661467 |
| MIR4428 | 41667 | HTM | Gastric Cancer | Carcinoma | SNU5 | NA | FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0032 | 32661467 |
| MIR4485 | 41628 | HTM | Gastric Cancer | Carcinoma | SNU5 | NA | FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0021 | 33798550 |
| MIR4487 | 41851 | HTM | Gastric Cancer | Carcinoma | SNU5 | NA | FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0032 | 33798550 |
| MIR4492 | 41563 | HTM | Gastric Cancer | Carcinoma | SNU5 | NA | FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0021 | 32661467 |
| MIR4529 | 41703 | HTM | Gastric Cancer | Carcinoma | SNU5 | NA | FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0011 | 33798550 |
| MIR4649 | 41852 | HTM | Gastric Cancer | Carcinoma | SNU5 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0021 | 32661467 |
| MIR4665 | 41696 | HTM | Gastric Cancer | Carcinoma | SNU5 | NA | FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0032 | 32661467 |
| MIR4706 | 41576 | HTM | Gastric Cancer | Carcinoma | SNU5 | NA | FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0021 | 32661467 |
| MIR4741 | 41661 | HTM | Gastric Cancer | Carcinoma | SNU5 | NA | FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0021 | 32661467 |
| MIR4749 | 41760 | HTM | Gastric Cancer | Carcinoma | SNU5 | NA | FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0021 | 32661467 |
| MIR494 | 32084 | HTM | Gastric Cancer | Carcinoma | SNU5 | NA | FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0032 | 33798550 |
| MIR5739 | 49977 | HTM | Gastric Cancer | Carcinoma | SNU5 | NA | FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0011 | 32661467 |
| MIR6126 | 50099 | HTM | Gastric Cancer | Carcinoma | SNU5 | NA | FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0011 | 32661467 |
| MIR668 | 33135 | HTM | Gastric Cancer | Carcinoma | SNU5 | NA | FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0021 | 33798550 |
| MIR668 | 33135 | HTM | Gastric Cancer | Carcinoma | SNU5 | NA | FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0021 | 32661467 |
| MIR6732 | 50066 | HTM | Gastric Cancer | Carcinoma | SNU5 | NA | FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0011 | 32661467 |
| MIR6768 | 50264 | HTM | Gastric Cancer | Carcinoma | SNU5 | NA | FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0011 | 32661467 |
| MIR6794 | 50117 | HTM | Gastric Cancer | Carcinoma | SNU5 | NA | FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0011 | 32661467 |
| MIR7110 | 50024 | HTM | Gastric Cancer | Carcinoma | SNU5 | NA | FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0021 | 32661467 |
| MIR7154 | 49972 | HTM | Gastric Cancer | Carcinoma | SNU5 | NA | FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0011 | 32661467 |
| MIR8073 | 50131 | HTM | Gastric Cancer | Carcinoma | SNU5 | NA | FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0011 | 32661467 |
| MIR8075 | 50172 | HTM | Gastric Cancer | Carcinoma | SNU5 | NA | FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0011 | 33798550 |