BCSCDB: Biomarkers of Cancer Stem Cells Database
Number of entries related to UM-SCC-38 cell line is 15
| GENE | HGNC_ID | MARKER_TYPE | CANCER_TYPE | HISTOLOGICAL_TYPE | CELL_LINE | CSC_ENRICHMENT | METHOD | EXPRESSION_LEVEL | CONFIDENCE_SCORING | GLOBAL_SCORING | PUBMED_ID |
|---|---|---|---|---|---|---|---|---|---|---|---|
| BMI1 | 1066 | LTM | Head and Neck Cancer | Squamous Cell Carcinoma | UM-SCC-38 | NA | qRT-PCR and Western Blotting followed by SFA | NA | 0.48 | 0.1135 | 32773768 |
| POU5F1 | 9221 | LTM | Head and Neck Cancer | Squamous Cell Carcinoma | UM-SCC-38 | NA | qRT-PCR and Western Blotting followed by SFA | NA | 0.48 | 0.6448 | 32773768 |
| POU5F1 | 9221 | LTM | Head and Neck Cancer | Squamous Cell Carcinoma | UM-SCC-38 | NA | Western Blotting | NA | 0.48 | 0.6448 | 25379016 |
| SOX2 | 11195 | LTM | Head and Neck Cancer | Squamous Cell Carcinoma | UM-SCC-38 | NA | qRT-PCR and Western Blotting followed by SFA | NA | 0.48 | 0.5695 | 32773768 |
| SOX2 | 11195 | LTM | Head and Neck Cancer | Squamous Cell Carcinoma | UM-SCC-38 | NA | Western Blotting | NA | 0.48 | 0.5695 | 25379016 |
| NANOG | 20857 | LTM | Head and Neck Cancer | Squamous Cell Carcinoma | UM-SCC-38 | NA | Western Blotting | NA | 0.28 | 0.5461 | 25379016 |
| ALDH1A1 | 402 | LTM | Head and Neck Cancer | Squamous Cell Carcinoma | UM-SCC-38 | NA | qRT-PCR followed by SFA | NA | 0.2 | 0.684 | 32773768 |
| ALDH1A1 | 402 | LTM | Head and Neck Cancer | Squamous Cell Carcinoma | UM-SCC-38 | NA | ALDEFLUOR assay followed by SFA | NA | 0.2 | 0.684 | 23585151 |
| GLI1 | 4317 | LTM | Head and Neck Cancer | Squamous Cell Carcinoma | UM-SCC-38 | NA | qRT-PCR followed by SFA | NA | 0.2 | 0.0308 | 32773768 |
| NOTCH1 | 7881 | LTM | Head and Neck Cancer | Squamous Cell Carcinoma | UM-SCC-38 | NA | qRT-PCR followed by SFA | NA | 0.2 | 0.0477 | 32773768 |
| SMO | 11119 | LTM | Head and Neck Cancer | Squamous Cell Carcinoma | UM-SCC-38 | NA | qRT-PCR followed by SFA | NA | 0.2 | 0.0212 | 32773768 |
| CD44 | 1681 | LTM | Head and Neck Cancer | Squamous Cell Carcinoma | UM-SCC-38 | NA | FACs followed by SFA | NA | 0.12 | 1 | 32773768 |
| CD44 | 1681 | LTM | Head and Neck Cancer | Squamous Cell Carcinoma | UM-SCC-38 | NA | FACs followed by SFA | NA | 0.12 | 1 | 31742606 |
| NGFR | 7809 | LTM | Head and Neck Cancer | Squamous Cell Carcinoma | UM-SCC-38 | NA | FACs followed by SFA | NA | 0.12 | 0.018 | 32773768 |
| NGFR | 7809 | LTM | Head and Neck Cancer | Squamous Cell Carcinoma | UM-SCC-38 | NA | FACs followed by SFA | NA | 0.12 | 0.018 | 31742606 |