BCSCDB: Biomarkers of Cancer Stem Cells Database
Number of entries related to HCC1588 cell line is 87
| GENE | HGNC_ID | MARKER_TYPE | CANCER_TYPE | HISTOLOGICAL_TYPE | CELL_LINE | CSC_ENRICHMENT | METHOD | EXPRESSION_LEVEL | CONFIDENCE_SCORING | GLOBAL_SCORING | PUBMED_ID |
|---|---|---|---|---|---|---|---|---|---|---|---|
| ALDH1A1 | 402 | LTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA followed by ALDEFLUOR assay and qRT-PCR | NA | 0.32 | 0.684 | 26711929 |
| MIR1246 | 35312 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics and qRT-PCR | Up | 0.24 | 0.0021 | 26711929 |
| NANOG | 20857 | LTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA followed by qRT-PCR | NA | 0.2 | 0.5461 | 26711929 |
| NOTCH3 | 7883 | LTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA followed by qRT-PCR | NA | 0.2 | 0.0085 | 26711929 |
| POU5F1 | 9221 | LTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA followed by qRT-PCR | NA | 0.2 | 0.6448 | 26711929 |
| SOX2 | 11195 | LTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA followed by qRT-PCR | NA | 0.2 | 0.5695 | 26711929 |
| MIR106B | 31495 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0011 | 26711929 |
| MIR1224 | 33923 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0011 | 26711929 |
| MIR1260B | 38258 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0032 | 26711929 |
| MIR1268A | 35336 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0021 | 26711929 |
| MIR1290 | 35283 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0021 | 26711929 |
| MIR129-2 | 31513 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0011 | 26711929 |
| MIR1307 | 35372 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0011 | 26711929 |
| MIR130A | 31514 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0021 | 26711929 |
| MIR130B | 31515 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0032 | 26711929 |
| MIR134 | 31519 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0021 | 26711929 |
| MIR15B | 31544 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0085 | 26711929 |
| MIR16-1 | 31545 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0032 | 26711929 |
| MIR16-2 | 31546 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0021 | 26711929 |
| MIR17 | 31547 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0032 | 26711929 |
| MIR17 | 31547 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0032 | 26711929 |
| MIR181A1 | 31590 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0042 | 26711929 |
| MIR18A | 31548 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0021 | 26711929 |
| MIR18B | 32025 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0011 | 26711929 |
| MIR193A | 31563 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0042 | 26711929 |
| MIR197 | 31569 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0021 | 26711929 |
| MIR19A | 31574 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0064 | 26711929 |
| MIR19B1 | 31575 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0042 | 26711929 |
| MIR200C | 31580 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0074 | 26711929 |
| MIR203A | 31581 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0021 | 26711929 |
| MIR20A | 31577 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0042 | 26711929 |
| MIR20B | 32024 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0042 | 26711929 |
| MIR210 | 31587 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0064 | 26711929 |
| MIR22 | 31599 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0021 | 26711929 |
| MIR22 | 31599 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0021 | 26711929 |
| MIR2392 | 41843 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0011 | 26711929 |
| MIR25 | 31609 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0032 | 26711929 |
| MIR301A | 31622 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0032 | 26711929 |
| MIR301B | 33667 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0011 | 26711929 |
| MIR30A | 31624 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0085 | 26711929 |
| MIR30D | 31628 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0032 | 26711929 |
| MIR3195 | 38250 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0021 | 26711929 |
| MIR32 | 31631 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0042 | 26711929 |
| MIR34B | 31636 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0011 | 26711929 |
| MIR34C | 31637 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0021 | 26711929 |
| MIR3646 | 38935 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0011 | 26711929 |
| MIR3652 | 38894 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0011 | 26711929 |
| MIR378A | 31871 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0053 | 26711929 |
| MIR423 | 31880 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0032 | 26711929 |
| MIR4257 | 38312 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0021 | 26711929 |
| MIR4274 | 38194 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0011 | 26711929 |
| MIR4284 | 38322 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0021 | 26711929 |
| MIR4327 | 38355 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0011 | 26711929 |
| MIR4436B1 | 41587 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0011 | 26711929 |
| MIR4443 | 41830 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0021 | 26711929 |
| MIR4446 | 41700 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0011 | 26711929 |
| MIR4455 | 41536 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0021 | 26711929 |
| MIR4463 | 41665 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0021 | 26711929 |
| MIR4465 | 41842 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0021 | 26711929 |
| MIR4499 | 41739 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0011 | 26711929 |
| MIR4516 | 41617 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0021 | 26711929 |
| MIR455 | 32344 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0021 | 26711929 |
| MIR455 | 32344 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0021 | 26711929 |
| MIR4656 | 41749 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0011 | 26711929 |
| MIR4697 | 41570 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0021 | 26711929 |
| MIR4739 | 41801 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0021 | 26711929 |
| MIR4763 | 41677 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0021 | 26711929 |
| MIR4778 | 41648 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0011 | 26711929 |
| MIR4788 | 41676 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0011 | 26711929 |
| MIR4800 | 41877 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0011 | 26711929 |
| MIR483 | 32340 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0053 | 26711929 |
| MIR5006 | 43495 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0011 | 26711929 |
| MIR513C | 33934 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0011 | 26711929 |
| MIR5194 | 43498 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0011 | 26711929 |
| MIR574 | 32830 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0032 | 26711929 |
| MIR582 | 32838 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0064 | 26711929 |
| MIR642B | 38902 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0011 | 26711929 |
| MIR652 | 32908 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0011 | 26711929 |
| MIR663A | 32919 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0021 | 26711929 |
| MIR664B | 43501 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0021 | 26711929 |
| MIR9-1 | 31641 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0011 | 26711929 |
| MIR9-1 | 31641 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0011 | 26711929 |
| MIR92A1 | 31643 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0011 | 26711929 |
| MIR93 | 31645 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0032 | 26711929 |
| MIR944 | 33690 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0021 | 26711929 |
| MIR95 | 31647 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Down | 0.04 | 0.0011 | 26711929 |
| SNORD138 | 50420 | HTM | Non Small Cell Lung Cancer | Squamous Cell Carcinoma | HCC1588 | NA | SFA and FACs for CSC marker followed by Transcriptomics | Up | 0.04 | 0.0021 | 26711929 |