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BCSCDB: Biomarkers of Cancer Stem Cells Database

Number of marker genes starting with is 193

GENE HGNC_ID CANCER_TYPE HISTOLOGICAL_TYPE CSC_ENRICHMENT METHOD CONFIDENCE_SCORING GLOBAL_SCORING PUBMED_ID
CD441681Colon CancerNANAqRT-PCR and Western Blotting followed by SFA0.64134271345
CD441681Colon CancerNANAIHC staining followed by qRT-PCR0.64133819194
CD441681Colon CancerNANAIHC staining followed by RT-PCR0.64119010307
CD441681Colon CancerNANAqRT-PCR followed by IHC staining0.64125625240
CD441681Colon CancerNANART-PCR and IHC staining0.64125625240
CD441681Colon CancerNANASFA followed by FACs and IF staining0.64123642368
CD441681Colon CancerNANATumorigenicity assay and SFA followed by IHC staining and FACs0.64119808966
CD441681Colon CancerNABlebbistatinSFA followed by Western Blotting0.64123002207
CD441681Colon CancerNANAIHC staining0.64135249490
CD441681Colon CancerNANAIHC staining0.64134609414
CD441681Colon CancerNANAIHC staining0.64122740326
CD441681Colon CancerNANAIHC staining0.64124696849
CD441681Colon CancerNANAIHC staining0.64125109336
CD441681Colon CancerNANAIHC staining0.64129102042
CD441681Colon CancerNANAIHC staining0.64131000786
CD441681Colon CancerNANAIHC staining0.64131578584
CD441681Colon CancerNANASFA and IF staining0.64124607406
CD441681Colon CancerNANAqRT-PCR0.64135392530
CD441681Colon CancerNANAqRT-PCR0.64124492635
CD441681Colon CancerNANAFACs0.64127354640
CD441681Colon CancerAdenocarcinomaNAFACs0.64129580161
CD441681Colon CancerNANAFACs0.64131973205
CD441681Colon CancerNANAFACs followed by CFA0.64118757407
CD441681Colon CancerNANAFACs followed by SFA0.64126745821
CD441681Colon CancerNANAFACs followed by SFA and Tumorigenicity assay0.64130790680
CD441681Colon CancerNANASFA followed by FACs0.64118765800
CD441681Colon CancerNANASFA followed by FACs0.64126383537
CD441681Colon CancerNANASFA followed by FACs0.64123643941
CD441681Colon CancerNAROCK inhibitorSFA followed by FACs and Tumorigenicity assay0.64123002207
CD441681Colon CancerNAY-27632SFA followed by FACs and Tumorigenicity assay0.64123002207
CD441681Colon CancerNANASFA followed by FACs and Tumorigenicity assay0.64129110645
LGR54504Colon CancerNANART-PCR followed by Western Blotting0.640.075328249897
LGR54504Colon CancerNANASFA followed by FACs and IHC staining0.640.075318765800
LGR54504Colon CancerNANAIHC staining0.640.075329102042
LGR54504Colon CancerNANAIHC staining0.640.075329328371
LGR54504Colon CancerNANAIHC staining0.640.075331000786
LGR54504Colon CancerNANAIHC staining0.640.075331186779
LGR54504Colon CancerNANASFA and IF staining0.640.075326745821
LGR54504Colon CancerNANART-PCR0.640.075321125339
LGR54504Colon CancerNANART-PCR0.640.075331057717
LGR54504Colon CancerNANASFA followed by FACs0.640.075325483065
LGR54504Colon CancerNANASFA followed by FACs0.640.075327197180
LGR54504Colon CancerNANASFA followed by FACs0.640.075323643941
LGR54504Colon CancerNANAIF staining0.640.075335008827
LGR54504Colon CancerNANAIHC staining0.640.075334657081
NANOG20857Colon CancerNANART-PCR followed by Western Blotting0.640.546128249897
NANOG20857Colon CancerNANAIHC staining followed by qRT-PCR0.640.546131491003
NANOG20857Colon CancerNA5-FluorouracilSFA followed by Western Blotting0.640.546130091203
NANOG20857Colon CancerNAOxaliplatinSFA followed by Western Blotting0.640.546130091203
NANOG20857Colon CancerNANAqRT-PCR0.640.546124492635
NANOG20857Colon CancerNANASFA followed by qRT-PCR0.640.546123643941
NANOG20857Colon CancerNA5-FluorouracilSFA followed by FACs0.640.546130091203
NANOG20857Colon CancerNAOxaliplatinSFA followed by FACs0.640.546130091203
NANOG20857Colon CancerNANAqRT-PCR and Western Blotting followed by SFA0.640.546134271345
NANOG20857Colon CancerNANASFA followed by Western Blotting0.640.546133500430
NOTCH37883Colon CancerNANART-PCR followed by Western Blotting0.640.008528249897
POU5F19221Colon CancerNANART-PCR followed by Western Blotting0.640.644828249897
POU5F19221Colon CancerNANASFA followed by Western Blotting0.640.644829110645
POU5F19221Colon CancerNA5-FluorouracilSFA followed by Western Blotting0.640.644830091203
POU5F19221Colon CancerNAOxaliplatinSFA followed by Western Blotting0.640.644830091203
POU5F19221Colon CancerNANAIHC staining0.640.644830177970
POU5F19221Colon CancerNANAIHC staining0.640.644831491003
POU5F19221Colon CancerNANASFA and IF staining0.640.644826745821
POU5F19221Colon CancerNANART-PCR0.640.644823545848
POU5F19221Colon CancerNANASFA followed by qRT-PCR0.640.644823643941
POU5F19221Colon CancerNA5-FluorouracilSFA followed by FACs0.640.644830091203
POU5F19221Colon CancerNAOxaliplatinSFA followed by FACs0.640.644830091203
POU5F19221Colon CancerNANAqRT-PCR and Western Blotting followed by SFA0.640.644834271345
POU5F19221Colon CancerNANASFA followed by Western Blotting0.640.644833500430
SOX211195Colon CancerNANAqRT-PCR and Western Blotting followed by SFA0.640.569534271345
SOX211195Colon CancerNANASFA followed by Western Blotting0.640.569533500430
SOX211195Colon CancerNANASFA followed by Western Blotting0.640.569529110645
SOX211195Colon CancerNA5-FluorouracilSFA followed by Western Blotting0.640.569530091203
SOX211195Colon CancerNAOxaliplatinSFA followed by Western Blotting0.640.569530091203
SOX211195Colon CancerNANAIHC staining0.640.569529102042
SOX211195Colon CancerNANAIHC staining0.640.569531186779
SOX211195Colon CancerNANASFA and IF staining0.640.569526745821
SOX211195Colon CancerNANART-PCR0.640.569523545848
SOX211195Colon CancerNA5-FluorouracilSFA followed by FACs0.640.569530091203
SOX211195Colon CancerNAOxaliplatinSFA followed by FACs0.640.569530091203
ALCAM400Colon CancerNANAIHC staining followed by RT-PCR0.60.058319010307
ALCAM400Colon CancerNANAIHC staining0.60.058322670157
ALCAM400Colon CancerNANAFACs followed by CFA0.60.058318757407
ALCAM400Colon CancerNANASFA followed by FACs0.60.058318765800
ALCAM400Colon CancerNANASFA followed by FACs and Tumorigenicity assay0.60.058329110645
EPCAM11529Colon CancerNANAIHC staining followed by RT-PCR0.60.21119010307
EPCAM11529Colon CancerNANATumorigenicity assay and SFA followed by IHC staining and FACs0.60.21119808966
EPCAM11529Colon CancerNANAIHC staining0.60.21122670157
EPCAM11529Colon CancerNANAIHC staining0.60.21131491003
EPCAM11529Colon CancerNANAFACs0.60.21127354640
EPCAM11529Colon CancerAdenocarcinomaNAFACs0.60.21129580161
EPCAM11529Colon CancerNANAFACs0.60.21131057717
EPCAM11529Colon CancerNANAFACs followed by CFA0.60.21118757407
EPCAM11529Colon CancerNANASFA and FACs0.60.21124944672
EPCAM11529Colon CancerNANASFA followed by FACs0.60.21120332776
EPCAM11529Colon CancerNANASFA followed by FACs and Tumorigenicity assay0.60.21119454726
EPCAM11529Colon CancerNANAIF staining0.60.21135008827
KLF46348Colon CancerNANAIHC staining followed by qRT-PCR0.60.089131491003
MYC7553Colon CancerNANAIHC staining followed by qRT-PCR0.60.130431491003
MYC7553Colon CancerNANART-PCR0.60.130421125339
PRDX29353Colon CancerNANAIHC staining followed by qRT-PCR0.60.007433819194
PROM19454Colon CancerNANAqRT-PCR followed by IHC staining0.60.758225625240
PROM19454Colon CancerNANART-PCR and IHC staining0.60.758225625240
PROM19454Colon CancerNANASFA followed by FACs and IF staining0.60.758227077950
PROM19454Colon CancerNANASFA and Western Blotting0.60.758224833610
PROM19454Colon CancerNANAWestern Blotting0.60.758224833610
PROM19454Colon CancerNANAIHC staining0.60.758219621338
PROM19454Colon CancerNANAIHC staining0.60.758222740326
PROM19454Colon CancerNANAIHC staining0.60.758222878609
PROM19454Colon CancerNANAIHC staining0.60.758222964035
PROM19454Colon CancerNANAIHC staining0.60.758229102042
PROM19454Colon CancerNANAIHC staining0.60.758229328371
PROM19454Colon CancerNANAIHC staining0.60.758231000786
PROM19454Colon CancerNANASFA and IF staining0.60.758224607406
PROM19454Colon CancerNANASFA followed by IHC staining0.60.758218371377
PROM19454Colon CancerNANAqRT-PCR0.60.758224492635
PROM19454Colon CancerNANART-PCR0.60.758223545848
PROM19454Colon CancerNANAFACs0.60.758231057717
PROM19454Colon CancerNANAFACs0.60.758231973205
PROM19454Colon CancerNANAFACs followed by CFA and Tumorigenicity assay0.60.758218757407
PROM19454Colon CancerNANAFACs followed by SFA0.60.758226745821
PROM19454Colon CancerNANAMACs0.60.758222753241
PROM19454Colon CancerNANAMACs followed by CFA and Tumorigenicity assay 0.60.758220530554
PROM19454Colon CancerNANAMACs followed by Tumorigenicity assay and SFA0.60.758218371377
PROM19454Colon CancerNANASFA and FACs0.60.758224944672
PROM19454Colon CancerNANASFA followed by FACs0.60.758218765800
PROM19454Colon CancerNANASFA followed by FACs0.60.758220332776
PROM19454Colon CancerNANASFA followed by FACs0.60.758223642368
PROM19454Colon CancerNANASFA followed by FACs0.60.758225483065
PROM19454Colon CancerNANASFA followed by FACs0.60.758226383537
PROM19454Colon CancerNANASFA followed by FACs0.60.758223643941
PROM19454Colon CancerNANASFA followed by FACs and Tumorigenicity assay0.60.758219454726
PROM19454Colon CancerNAROCK inhibitorSFA followed by FACs and Tumorigenicity assay0.60.758223002207
PROM19454Colon CancerNAY-27632SFA followed by FACs and Tumorigenicity assay0.60.758223002207
PROM19454Colon CancerNANASFA followed by FACs and Tumorigenicity assay0.60.758229110645
PROM19454Colon CancerNANAIHC staining followed by qRT-PCR0.60.758233819194
PROM19454Colon CancerNANAIHC staining0.60.758234609414
PROM19454Colon CancerNANAqRT-PCR0.60.758235392530
ALDH1A1402Colon CancerNANASFA followed by ALDEFLUOR assay and IF staining0.520.68423642368
ALDH1A1402Colon CancerNANASFA followed by FACs and IF staining0.520.68427077950
ALDH1A1402Colon CancerNAOxaliplatinSFA followed by Western Blotting0.520.68430091203
ALDH1A1402Colon CancerNAOxaliplatinSFA followed by Western Blotting0.520.68430091203
ALDH1A1402Colon CancerNANAIHC staining0.520.68434609414
ALDH1A1402Colon CancerNANAIHC staining0.520.68422670157
ALDH1A1402Colon CancerNANAIHC staining0.520.68429102042
ALDH1A1402Colon CancerNANAIHC staining0.520.68429328371
ALDH1A1402Colon CancerNANAIHC staining0.520.68431000786
ALDH1A1402Colon CancerNANAIHC staining0.520.68431186779
ALDH1A1402Colon CancerNANAIHC staining0.520.68431516883
ALDH1A1402Colon CancerNANAIHC staining followed by Tumorigenicity assay0.520.68422902411
ALDH1A1402Colon CancerNANASFA and IHC staining0.520.68424953984
ALDH1A1402Colon CancerNANATumorigenicity assay followed by IHC staining and SFA0.520.68419808966
ALDH1A1402Colon CancerNANAqRT-PCR0.520.68435392530
ALDH1A1402Colon CancerNANAqRT-PCR0.520.68424492635
ALDH1A1402Colon CancerNANAALDEFLUOR assay0.520.68422902411
ALDH1A1402Colon CancerNANAALDEFLUOR assay0.520.68427448961
ALDH1A1402Colon CancerNANAALDEFLUOR assay followed by SFA0.520.68430738331
ALDH1A1402Colon CancerNANAALDEFLUOR assay followed byTumorigenicity assay0.520.68428881576
ALDH1A1402Colon CancerNANAFACs0.520.68422871210
ALDH1A1402Colon CancerNANASFA followed by ALDEFLUOR assay0.520.68427197176
ALDH1A1402Colon CancerNA5-FluorouracilSFA followed by FACs0.520.68430091203
ALDH1A1402Colon CancerNAOxaliplatinSFA followed by FACs0.520.68430091203
ALDH1A1402Colon CancerNANASFA followed by FACs0.520.68423643941
COPE2234Colon CancerNANAFACs for CSC marker followed by Transcriptomics and qPCR0.40.002120530554
ABCG274Colon CancerNANASFA followed by Western Blotting0.360.173929110645
ABCG274Colon CancerAdenocarcinomaNASP assay followed by SFA and Western Blotting0.360.173925997915
ABCG274Colon CancerNANAIHC staining0.360.173931186779
ABCG274Colon CancerNANAIHC staining0.360.173931516883
ABCG274Colon CancerNANAqRT-PCR0.360.173924492635
CTNNB12514Colon CancerNANAIHC staining followed by Tumorigenicity assay0.360.064722902411
CTNNB12514Colon CancerNANASFA followed by Western Blotting0.360.064733500430
HMGA15010Colon CancerNANASFA and Western Blotting0.360.004224833610
HMGA15010Colon CancerNANAWestern Blotting0.360.004224833610
MSI17330Colon CancerNANASFA followed by Western Blotting0.360.020129110645
ALDH1B1407Colon CancerNANAIHC staining0.320.003222670157
ALDH1B1407Colon CancerNANASFA followed by FACs0.320.003226383537
CD241645Colon CancerNANAIHC staining0.320.45634609414
CD241645Colon CancerNANAIHC staining0.320.45624696849
CD241645Colon CancerNANAFACs followed by SFA0.320.45626745821
CD241645Colon CancerNANAFACs followed by SFA and Tumorigenicity assay0.320.45630790680
CD241645Colon CancerNANASFA followed by FACs0.320.45618765800
DCLK12700Colon CancerAdenocarcinomaNAIHC staining0.320.015928414327
DPP43009Colon CancerNANAIHC staining0.320.008534609414
ITGB16153Colon CancerNANAIHC staining0.320.01822670157
ABCB140Colon CancerNANASFA and qPCR0.280.060424944672
BMI11066Colon CancerNANAqRT-PCR0.280.113524492635
BMI11066Colon CancerNANART-PCR0.280.113531057717
BMI11066Colon CancerNANASFA followed by qRT-PCR0.280.113523643941
BMI11066Colon CancerNANASFA followed by FACs0.280.113527197180
HES15192Colon CancerNANAqRT-PCR and Tumorigenicity assay0.280.009524492635
TWIST112428Colon CancerNANART-PCR0.280.019123545848
CXCR42561Colon CancerNANAFACs0.20.049822871210
ITGA66142Colon CancerNANAFACs followed by CFA0.20.026518757407