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BCSCDB: Biomarkers of Cancer Stem Cells Database

Number of interactions with A549 is 113

INTERACTOR1 INT1_HGNC_ID INTERACTOR2 INT2_HGNC_ID INTERACTION_TYPE CSC_METHOD CANCER_TYPE HISTOLOGICAL_TYPE CELL_LINE INTERACTION_METHOD EXPRESSION_LEVEL PUBMED_ID
NFATC27776ABCG274Protein-Gene InteractionFACs for CSC markerNon Small Cell Lung CancerCarcinomaA549ChIP-qPCRUp33707423
MIR58232838BMP41071miRNA-mRNA InteractionSFA and SP assayNon Small Cell Lung CancerCarcinomaA549Transfection with MIR582 mimic followed by qRT-PCRUp26468775
MIR58232838CCND11582miRNA-mRNA InteractionSFA and SP assayNon Small Cell Lung CancerCarcinomaA549Transfection with MIR582 mimic followed by qRT-PCRUp26468775
MIR58232838CD441681miRNA-mRNA InteractionSFA and SP assayNon Small Cell Lung CancerCarcinomaA549Transfection with MIR582 mimic followed by qRT-PCRUp26468775
ELAVL13312CDK31772RNA-Protein InteractionFACs followed by SFANon Small Cell Lung CancerCarcinomaA549RIP assayUp29344850
MIR58232838FGF183674miRNA-mRNA InteractionSFA and SP assayNon Small Cell Lung CancerCarcinomaA549Transfection with MIR582 mimic followed by qRT-PCRUp26468775
TBX2111599IL46014Protein-Gene InteractionSP assay and FACs for CSC markerNon Small Cell Lung CancerCarcinomaA549ChIP assay followed by PCRUp29615105
POU5F19221LGALS36563Gene-Gene InteractionNANon Small Cell Lung CancerCarcinomaA549Stable forced expression of POU5F1 followed by qRT-PCRUp26447186
POU5F19221MMP27166Protein-Gene InteractionSFANon Small Cell Lung CancerCarcinomaA549ChIP assay followed by Luciferase Reporter assayUp24386189
MIR58232838MYC7553miRNA-mRNA InteractionSFA and SP assayNon Small Cell Lung CancerCarcinomaA549Transfection with MIR582 mimic followed by qRT-PCRUp26468775
NFATC27776NOTCH37883Protein-Gene InteractionFACs for CSC markerNon Small Cell Lung CancerCarcinomaA549ChIP-qPCRUp33707423
CTNNB12514PROM19454Protein-Gene InteractionSFA and SP assayNon Small Cell Lung CancerCarcinomaA549ChIP assay followed by PCRUp26075748
SMARCC211105SNAI211094Protein-Gene InteractionSFANon Small Cell Lung CancerCarcinomaA549ChIP assay followed by qRT-PCRUp27766570
MIR58232838TWIST112428miRNA-mRNA InteractionSFA and SP assayNon Small Cell Lung CancerCarcinomaA549Transfection with MIR582 mimic followed by qRT-PCRUp26468775
UBE3C16803AHNAK347Protein-Protein InteractionSFANon Small Cell Lung CancerCarcinomaA549Co-IP assay followed by Western BlottingNA30503554
UBE3C16803AHNAK347Protein-Protein InteractionSFA and ALDEFLUOR assayNon Small Cell Lung CancerCarcinomaA549Co-IP assay followed by Western BlottingNA30503554
CEBPB1834ALDH1A1402Protein-Gene InteractionSFANon Small Cell Lung CancerCarcinomaA549ChIP assay followed by qPCRNA28420235
RNF16826661RHOC669Protein-Protein InteractionNANon Small Cell Lung CancerCarcinomaA549Co-IP assay followed by Western BlottingNA34873829
SOX211195CDK11722Protein-Protein InteractionNANon Small Cell Lung CancerCarcinomaA549Co-IP assay followed by Western BlottingNA33721187
CTNNB12514CDH11748Protein-Protein InteractionSFANon Small Cell Lung CancerCarcinomaA549Co-IP assay followed by Western BlottingNA26075748
LGALS36563CTNNB12514Protein-Protein InteractionSFA followed by FACsNon Small Cell Lung CancerCarcinomaA549Co-IP assay followed by Western BlottingNA25669973
EFEMP13218EGFR3236Protein-Protein InteractionSFA and ALDEFLUOR assayNon Small Cell Lung CancerCarcinomaA549Co-IP assay followed by Western BlottingNA24013232
CDK31772ELAVL13312RNA-Protein InteractionSFANon Small Cell Lung CancerCarcinomaA549RIP assay followed by qRT-PCRNA29344850
EFEMP13218IGF1R5465Protein-Protein InteractionSFANon Small Cell Lung CancerCarcinomaA549Co-IP assay followed by Western BlottingNA24013232
HSPB15246KLF46348Protein-Protein InteractionSP assay and SFANon Small Cell Lung CancerCarcinomaA549Co-IP assay followed by Western BlottingNA28460458
HSPB15246MYC7553Protein-Protein InteractionSP assay and SFANon Small Cell Lung CancerCarcinomaA549Co-IP assay followed by Western BlottingNA28460458
BACH1935POU5F19221Protein-Gene InteractionNANon Small Cell Lung CancerCarcinomaA549ChIP-qPCRNA34949193
CD441681POU5F19221Protein-Gene InteractionNANon Small Cell Lung CancerCarcinomaA549ChIP-qPCRNA34949193
HSPB15246POU5F19221Protein-Protein InteractionSP assay and SFANon Small Cell Lung CancerCarcinomaA549Co-IP assay followed by Western BlottingNA28460458
NDRG17679SKP210901Protein-Protein InteractionSP assay and SFANon Small Cell Lung CancerCarcinomaA549Co-IP assayNA28456659
BACH1935SOX211195Protein-Gene InteractionNANon Small Cell Lung CancerCarcinomaA549ChIP-qPCRNA34949193
CD441681SOX211195Protein-Gene InteractionNANon Small Cell Lung CancerCarcinomaA549ChIP-qPCRNA34949193
HSPB15246SOX211195Protein-Protein InteractionSFANon Small Cell Lung CancerCarcinomaA549Co-IP assay followed by Western BlottingNA28460458
SNAI211094SOX911204Protein-Protein InteractionSFA and SP assayNon Small Cell Lung CancerCarcinomaA549Co-IP assay followed by Western BlottingNA26387547
CTNNB12514SPP111255Protein-Gene InteractionNANon Small Cell Lung CancerCarcinomaA549ChIP assay followed by RT- PCRNA29254164
SOX511201YAP116262Protein-Protein InteractionSFANon Small Cell Lung CancerCarcinomaA549Co-IP assay followed by Western BlottingNA29888108
BACH1935NANOG20857Protein-Gene InteractionNANon Small Cell Lung CancerCarcinomaA549ChIP-qPCRNA34949193
CD441681NANOG20857Protein-Gene InteractionNANon Small Cell Lung CancerCarcinomaA549ChIP-qPCRNA34949193
HSPB15246NANOG20857Protein-Protein InteractionSP assay and SFANon Small Cell Lung CancerCarcinomaA549Co-IP assay followed by Western BlottingNA28460458
FENDRR43894ABCB140miRNA-mRNA InteractionSFANon Small Cell Lung CancerCarcinomaA549Luciferase Reporter assayDown30981768
CTNNB12514ABCG274Gene-Gene InteractionNANon Small Cell Lung CancerCarcinomaA549SiRNA mediated knockdown of CTNNB1 followed by qRT-PCRDown33980809
SOX211195ABCG274Gene-Gene InteractionNANon Small Cell Lung CancerCarcinomaA549SiRNA mediated knockdown of SOX2 followed by qRT-PCRDown23009336
ATG5589ALDH1A1402Gene-Gene InteractionNANon Small Cell Lung CancerCarcinomaA549SiRNA mediated knockdown of ATG5 followed by qRT-PCRDown33468994
CTNNB12514ALDH1A1402Gene-Gene InteractionNANon Small Cell Lung CancerCarcinomaA549SiRNA mediated knockdown of CTNNB1 followed by qRT-PCRDown33980809
IL66018ALDH1A1402Gene-Gene InteractionNANon Small Cell Lung CancerCarcinomaA549SiRNA mediated knockdown of IL6 followed by qRT-PCRDown27009878
ZEB111642ALDH1A1402Gene-Gene InteractionNANon Small Cell Lung CancerCarcinomaA549ShRNA mediated knockdown of ZEB1 followed by qRT-PCRDown33468994
FOXD33804ALDH3A1405Protein-Gene InteractionSFANon Small Cell Lung CancerCarcinomaA549ChIP seq followed by qChIpDown30703266
TSPYL529367ALDH1A3409Gene-Gene InteractionNANon Small Cell Lung CancerCarcinomaA549SiRNA mediated knockdown of TSPYL5 followed by qRT-PCRDown34163000
MIR18A31548ATM795miRNA-mRNA InteractionSFANon Small Cell Lung CancerCarcinomaA549Transfection with MIR18A mimic followed by Dual Luciferase Reporter assayDown29860718
MIR58232838AXIN1903miRNA-mRNA InteractionSFA and SP assayNon Small Cell Lung CancerCarcinomaA549Transfection of MIR582 mimics followed by RNA immunoprecipitation assay and qRT-PCRDown26468775
NRP18004BMI11066Gene-Gene InteractionNANon Small Cell Lung CancerCarcinomaA549ShRNA mediated knockdown of NRP1 followed by qRT-PCRDown29138851
FOXD33804CBX31553Protein-Gene InteractionSFANon Small Cell Lung CancerCarcinomaA549ChIP seq followed by qChIpDown30703266
BACH1935CD441681Gene-Gene InteractionNANon Small Cell Lung CancerCarcinomaA549ShRNA mediated knockdown of BACH1 followed by qRT-PCRDown34949193
TSPYL529367CD441681Gene-Gene InteractionNANon Small Cell Lung CancerCarcinomaA549SiRNA mediated knockdown of TSPYL5 followed by qRT-PCRDown34163000
MIR15031537CTNNB12514miRNA-mRNA InteractionSFANon Small Cell Lung CancerCarcinomaA549Luciferase Reporter assayDown31121479
PROM19454CXCR42561Gene-Gene InteractionNANon Small Cell Lung CancerCarcinomaA549SiRAN mediated knockdown of PROM1 followed by qRT-PCRDown28000861
MIR58232838DKK32893miRNA-mRNA InteractionSFA and SP assayNon Small Cell Lung CancerCarcinomaA549Transfection of MIR582 mimics followed by RNA immunoprecipitation assay and qRT-PCRDown26468775
MIR129-131512DLK12907miRNA-mRNA InteractionSFANon Small Cell Lung CancerCarcinomaA549Transfection with MIR129-1 mimics followed by qRT-PCR and Western BlottingDown28619508
MIR70833654DNMT3A2978miRNA-mRNA InteractionSFANon Small Cell Lung CancerCarcinomaA549Transfection with MIR708 mimics followed by Luciferase Reporter assay and Western BlottingDown28972040
MIR129035283FRK3955miRNA-mRNA InteractionSFANon Small Cell Lung CancerCarcinomaA549Transfection with miR1290 mimmics followed by Luciferase Reporter assayDown25783528
MIR41032065GSK3B4617miRNA-mRNA InteractionSFANon Small Cell Lung CancerCarcinomaA549Transfection of MIR410 mimics followed by Luciferase Reporter assayDown28076327
MIR18A31548HIF1A4910miRNA-mRNA InteractionSFANon Small Cell Lung CancerCarcinomaA549Transfection with MIR18A mimic followed by Dual Luciferase Reporter assayDown29860718
FOXD33804HMGB14983Protein-Gene InteractionSFANon Small Cell Lung CancerCarcinomaA549ChIP seq followed by qChIpDown30703266
MIR15031537HMGA25009miRNA-mRNA InteractionSFANon Small Cell Lung CancerCarcinomaA549Luciferase Reporter assayDown31121479
POU5F19221MMP27166Gene-Gene InteractionSFANon Small Cell Lung CancerCarcinomaA549ShRNA mediated knockdown of POU5F1 followed by qRT-PCRDown24386189
MIR128-131510MUC17508miRNA-mRNA InteractionSFANon Small Cell Lung CancerCarcinomaA549Transfection with MIR128-1 followed by Luciferase Reporter assayDown29299167
HDAC34854MYC7553Protein-Gene InteractionSFANon Small Cell Lung CancerCarcinomaA549ChIP assay followed by PCRDown30258097
ITGB16153MYC7553Gene-Gene InteractionNANon Small Cell Lung CancerCarcinomaA549ShRNA mediated knockdown of ITGB1 followed by RT-PCRDown30485693
SLC16A110922MYC7553Gene-Gene InteractionNANon Small Cell Lung CancerCarcinomaA549ShRNA mediated knockdown of ZIC2 followed by qRT-PCRDown32922547
SOX211195MYC7553Gene-Gene InteractionNANon Small Cell Lung CancerCarcinomaA549ShRNA mediated knockdown of SOX2 followed by RT-PCRDown22615765
TP5311998MYC7553Protein-Gene InteractionSFANon Small Cell Lung CancerCarcinomaA549ChIP assay followed by qRT-PCRDown30503554
UBE3C16803MYC7553Gene-Gene InteractionNANon Small Cell Lung CancerCarcinomaA549ShRNA mediated knockdown of UBE3C followed by qRT-PCRDown30503554
ZNF32223640MYC7553Protein-Gene InteractionSFANon Small Cell Lung CancerCarcinomaA549ChIP assay followed by PCRDown30258097
SOX211195NOTCH17881Gene-Gene InteractionNANon Small Cell Lung CancerCarcinomaA549ShRNA mediated knockdown of SOX2 followed by RT-PCRDown22615765
ATG5589POU5F19221Gene-Gene InteractionNANon Small Cell Lung CancerCarcinomaA549SiRNA mediated knockdown of ATG5 followed by qRT-PCRDown33468994
BACH1935POU5F19221Gene-Gene InteractionNANon Small Cell Lung CancerCarcinomaA549ShRNA mediated knockdown of BACH1 followed by qRT-PCRDown34949193
IL66018POU5F19221Gene-Gene InteractionNANon Small Cell Lung CancerCarcinomaA549SiRNA mediated knockdown of IL6 followed by qRT-PCRDown27009878
ITGB16153POU5F19221Gene-Gene InteractionNANon Small Cell Lung CancerCarcinomaA549ShRNA mediated knockdown of ITGB1 followed by RT-PCRDown30485693
LDHA6535POU5F19221Gene-Gene InteractionNANon Small Cell Lung CancerCarcinomaA549ShRNA mediated knockdown of LDHA followed by qRT-PCRDown34178639
NRP18004POU5F19221Gene-Gene InteractionNANon Small Cell Lung CancerCarcinomaA549ShRNA mediated knockdown of NRP1 followed by qRT-PCRDown29138851
TCF711639POU5F19221Gene-Gene InteractionNANon Small Cell Lung CancerCarcinomaA549ShRNA mediated knockdown of lnc TCF 7 followed by qRT-PCRDown27766570
ZEB111642POU5F19221Gene-Gene InteractionNANon Small Cell Lung CancerCarcinomaA549ShRNA mediated knockdown of ZEB1 followed by qRT-PCRDown33468994
UBE3C16803POU5F19221Gene-Gene InteractionNANon Small Cell Lung CancerCarcinomaA549ShRNA mediated knockdown of UBE3C followed by qRT-PCRDown30503554
MIR12231501PRDX29353miRNA-mRNA InteractionEnrichment by Gefitinib drugNon Small Cell Lung CancerCarcinomaA549Transfection with MIR122 mimic followed by Western Blotting and ICC stainingDown30341415
ATG5589PROM19454Gene-Gene InteractionNANon Small Cell Lung CancerCarcinomaA549SiRNA mediated knockdown of ATG5 followed by qRT-PCRDown33468994
IL66018PROM19454Gene-Gene InteractionNANon Small Cell Lung CancerCarcinomaA549SiRNA mediated knockdown of IL6 followed by qRT-PCRDown27009878
ITGB16153PROM19454Gene-Gene InteractionNANon Small Cell Lung CancerCarcinomaA549ShRNA mediated knockdown of ITGB1 followed by RT-PCRDown30485693
SLC16A110922PROM19454Gene-Gene InteractionNANon Small Cell Lung CancerCarcinomaA549Lentiviral mediated knockdown of SLC16A1 followed by qRT-PCRDown31891569
ZEB111642PROM19454Gene-Gene InteractionNANon Small Cell Lung CancerCarcinomaA549ShRNA mediated knockdown of ZEB1 followed by qRT-PCRDown33468994
MIR510043540RAB6A9786miRNA-mRNA InteractionSFANon Small Cell Lung CancerCarcinomaA549Transfection with MIR5100 mimic followed by Luciferase Reporter assayand Western BlottingDown29144562
MIR48532067RXRA10477miRNA-mRNA InteractionSFANon Small Cell Lung CancerCarcinomaA549Transfection with MIR485 mimic followed by Dual Luciferase Reporter assayDown30058740
FOXD33804SET10760Protein-Gene InteractionSFANon Small Cell Lung CancerCarcinomaA549ChIP seq followed by qChIpDown30703266
MIR58232838SFRP110776miRNA-mRNA InteractionSFA and SP assayNon Small Cell Lung CancerCarcinomaA549Transfection of MIR582 mimics followed by RNA immunoprecipitation assay and qRT-PCRDown26468775
BACH1935SOX211195Gene-Gene InteractionNANon Small Cell Lung CancerCarcinomaA549ShRNA mediated knockdown of BACH1 followed by qRT-PCRDown34949193
IL66018SOX211195Gene-Gene InteractionNANon Small Cell Lung CancerCarcinomaA549SiRNA mediated knockdown of IL6 followed by qRT-PCRDown27009878
ITGB16153SOX211195Gene-Gene InteractionNANon Small Cell Lung CancerCarcinomaA549ShRNA mediated knockdown of ITGB1 followed by RT-PCRDown30485693
LDHA6535SOX211195Gene-Gene InteractionNANon Small Cell Lung CancerCarcinomaA549ShRNA mediated knockdown of LDHA followed by qRT-PCRDown34178639
TCF711639SOX211195Gene-Gene InteractionNANon Small Cell Lung CancerCarcinomaA549ShRNA mediated knockdown of lnc TCF 7 followed by qRT-PCRDown27766570
TP5311998SOX211195Protein-Gene InteractionSFANon Small Cell Lung CancerCarcinomaA549ChIP assay followed by qRT-PCRDown30503554
TCF711639EpCAM11529Gene-Gene InteractionNANon Small Cell Lung CancerCarcinomaA549ShRNA mediated knockdown of lnc TCF 7 followed by qRT-PCRDown27766570
FOXD33804WDR512757Protein-Gene InteractionSFANon Small Cell Lung CancerCarcinomaA549ChIP seq followed by qChIpDown30703266
FOXD33804NSD212766Protein-Gene InteractionSFANon Small Cell Lung CancerCarcinomaA549ChIP seq followed by qChIpDown30703266
SOX211195WNT112774Gene-Gene InteractionNANon Small Cell Lung CancerCarcinomaA549ShRNA mediated knockdown of SOX2 followed by RT-PCRDown22615765
MIR21431591CTNNBIP116913miRNA-mRNA InteractionSFANon Small Cell Lung CancerCarcinomaA549Transfection with MIR214 mimmics followed by Luciferase Reporter assay and qRT-PCRDown26299367
MIR15031537GSKIP20343miRNA-mRNA InteractionSFANon Small Cell Lung CancerCarcinomaA549Luciferase Reporter assayDown31121479
ATG5589NANOG20857Gene-Gene InteractionNANon Small Cell Lung CancerCarcinomaA549SiRNA mediated knockdown of ATG5 followed by qRT-PCRDown33468994
BACH1935NANOG20857Gene-Gene InteractionNANon Small Cell Lung CancerCarcinomaA549ShRNA mediated knockdown of BACH1 followed by qRT-PCRDown34949193
CTNNB12514NANOG20857Gene-Gene InteractionNANon Small Cell Lung CancerCarcinomaA549SiRNA mediated knockdown of CTNNB1 followed by qRT-PCRDown33980809
IL66018NANOG20857Gene-Gene InteractionNANon Small Cell Lung CancerCarcinomaA549SiRNA mediated knockdown of IL6 followed by qRT-PCRDown27009878
ITGB16153NANOG20857Gene-Gene InteractionNANon Small Cell Lung CancerCarcinomaA549ShRNA mediated knockdown of ITGB1 followed by RT-PCRDown30485693
LDHA6535NANOG20857Gene-Gene InteractionNANon Small Cell Lung CancerCarcinomaA549ShRNA mediated knockdown of LDHA followed by qRT-PCRDown34178639
TCF711639NANOG20857Gene-Gene InteractionNANon Small Cell Lung CancerCarcinomaA549ShRNA mediated knockdown of lnc TCF 7 followed by qRT-PCRDown27766570
ZEB111642NANOG20857Gene-Gene InteractionNANon Small Cell Lung CancerCarcinomaA549ShRNA mediated knockdown of ZEB1 followed by qRT-PCRDown33468994