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BCSCDB: Biomarkers of Cancer Stem Cells Database

Number of interactions with SW1990 is 47

INTERACTOR1 INT1_HGNC_ID INTERACTOR2 INT2_HGNC_ID INTERACTION_TYPE CSC_METHOD CANCER_TYPE HISTOLOGICAL_TYPE CELL_LINE INTERACTION_METHOD EXPRESSION_LEVEL PUBMED_ID
STAT311364BMI11066Protein-Gene InteractionNAPancreatic CancerAdenocarcinomaSW1990ChIP assayUp27576197
STAT311364SOX211195Protein-Gene InteractionNAPancreatic CancerAdenocarcinomaSW1990ChIP assayUp27576197
STAT311364NANOG20857Protein-Gene InteractionNAPancreatic CancerAdenocarcinomaSW1990ChIP assayUp27576197
PHF5A18000ABCB546Protein-Gene InteractionSP assayPancreatic CancerAdenocarcinomaSW1990ChIP-Seq assayNA32781084
PAF125459ABCB546Protein-Gene InteractionSP assayPancreatic CancerAdenocarcinomaSW1990ChIP-Seq assayNA32781084
PAF125459DDX3X2745Protein-Protein InteractionSP assayPancreatic CancerAdenocarcinomaSW1990Co-IP assay followed by Western BlottingNA32781084
PHF5A18000ERBB23430Protein-Gene InteractionSP assayPancreatic CancerAdenocarcinomaSW1990ChIP-Seq assayNA32781084
PAF125459ERBB23430Protein-Gene InteractionSP assayPancreatic CancerAdenocarcinomaSW1990ChIP-Seq assayNA32781084
SKI10896GLI24318Protein-Protein InteractionSFAPancreatic CancerAdenocarcinomaSW1990Co-IP assayNA27734340
PHF5A18000LIF6596Protein-Gene InteractionSP assayPancreatic CancerAdenocarcinomaSW1990ChIP-Seq assayNA32781084
PAF125459LIF6596Protein-Gene InteractionSP assayPancreatic CancerAdenocarcinomaSW1990ChIP-Seq assayNA32781084
PHF5A18000POU5F19221Protein-Gene InteractionSP assayPancreatic CancerAdenocarcinomaSW1990ChIP-Seq assayNA32781084
PAF125459POU5F19221Protein-Gene InteractionSP assayPancreatic CancerAdenocarcinomaSW1990ChIP-Seq assayNA32781084
PHF5A18000SOX911204Protein-Gene InteractionSP assayPancreatic CancerAdenocarcinomaSW1990ChIP-Seq assayNA32781084
PAF125459SOX911204Protein-Gene InteractionSP assayPancreatic CancerAdenocarcinomaSW1990ChIP-Seq assayNA32781084
HOTTIP37461WDR512757RNA-Protein InteractionSFAPancreatic CancerAdenocarcinomaSW1990RIP assay followed by qRT-PCRNA28947139
PAF125459CDC7316783Protein-Protein InteractionSP assayPancreatic CancerAdenocarcinomaSW1990Reciprocal Co-IP assay followed by Western BlottingNA32781084
PAF125459CTR916850Protein-Protein InteractionSP assayPancreatic CancerAdenocarcinomaSW1990Reciprocal Co-IP assay followed by Western BlottingNA32781084
PAF125459PHF5A18000Protein-Protein InteractionSP assayPancreatic CancerAdenocarcinomaSW1990Reciprocal Co-IP assay followed by Western BlottingNA32781084
DDX3X2745NANOG20857Protein-Gene InteractionSP assayPancreatic CancerAdenocarcinomaSW1990ChIP-Seq assay followed by PCR NA32781084
PHF5A18000NANOG20857Protein-Gene InteractionSP assayPancreatic CancerAdenocarcinomaSW1990ChIP-Seq assayNA32781084
PAF125459NANOG20857Protein-Gene InteractionSP assayPancreatic CancerAdenocarcinomaSW1990ChIP-Seq assayNA32781084
PAF125459LEO130401Protein-Protein InteractionSP assayPancreatic CancerAdenocarcinomaSW1990Reciprocal Co-IP assay followed by Western BlottingNA32781084
PAF125459ABCB445Gene-Gene InteractionNAPancreatic CancerAdenocarcinomaSW1990SiRNA mediated knockdown of PAF1 followed by RT-PCRDown25003666
HOXA95109ALDH1A1402Gene-Gene InteractionSFAPancreatic CancerAdenocarcinomaSW1990SiRNA mediated knockdown of HOXA9 followed by qRT-PCRDown28947139
STAT311364BMI11066Gene-Gene InteractionNAPancreatic CancerAdenocarcinomaSW1990SiRNA mediated knockdown of STAT3 followed by qRT-PCRDown27576197
HOXA95109CD441681Gene-Gene InteractionSFAPancreatic CancerAdenocarcinomaSW1990SiRNA mediated knockdown of HOXA9 followed by qRT-PCRDown28947139
PAF125459CEBPA1833Gene-Gene InteractionSP assayPancreatic CancerAdenocarcinomaSW1990CRISPER Cas9 mediated knockdown of PAF1 and RT2 profiler PCR array followed by qRT-PCRDown32781084
PAF125459CEBPB1834Gene-Gene InteractionSP assayPancreatic CancerAdenocarcinomaSW1990CRISPER Cas9 mediated knockdown of PAF1 and RT2 profiler PCR array followed by qRT-PCRDown32781084
PAF125459CREBBP2348Gene-Gene InteractionSP assayPancreatic CancerAdenocarcinomaSW1990CRISPER Cas9 mediated knockdown of PAF1 and RT2 profiler PCR array followed by qRT-PCRDown32781084
PAF125459CTNNB12514Gene-Gene InteractionSP assayPancreatic CancerAdenocarcinomaSW1990CRISPER Cas9 mediated knockdown of PAF1 and RT2 profiler PCR array followed by qRT-PCRDown32781084
PAF125459ELK13321Gene-Gene InteractionSP assayPancreatic CancerAdenocarcinomaSW1990CRISPER Cas9 mediated knockdown of PAF1 and RT2 profiler PCR array followed by qRT-PCRDown32781084
PAF125459GATA34172Gene-Gene InteractionSP assayPancreatic CancerAdenocarcinomaSW1990CRISPER Cas9 mediated knockdown of PAF1 and RT2 profiler PCR array followed by qRT-PCRDown32781084
PAF125459FOXA25022Gene-Gene InteractionSP assayPancreatic CancerAdenocarcinomaSW1990CRISPER Cas9 mediated knockdown of PAF1 and RT2 profiler PCR array followed by qRT-PCRDown32781084
PAF125459JUNB6205Gene-Gene InteractionSP assayPancreatic CancerAdenocarcinomaSW1990CRISPER Cas9 mediated knockdown of PAF1 and RT2 profiler PCR array followed by qRT-PCRDown32781084
HOXA95109PROM19454Gene-Gene InteractionSFAPancreatic CancerAdenocarcinomaSW1990SiRNA mediated knockdown of HOXA9 followed by qRT-PCRDown28947139
PAF125459PROM19454Gene-Gene InteractionNAPancreatic CancerAdenocarcinomaSW1990SiRNA mediated knockdown of PAF1 followed by RT-PCRDown25003666
HOXA95109SOX211195Gene-Gene InteractionSFAPancreatic CancerAdenocarcinomaSW1990SiRNA mediated knockdown of HOXA9 followed by qRT-PCRDown28947139
STAT311364SOX211195Gene-Gene InteractionNAPancreatic CancerAdenocarcinomaSW1990SiRNA mediated knockdown of STAT3 followed by qRT-PCRDown27576197
PAF125459STAT311364Gene-Gene InteractionSP assayPancreatic CancerAdenocarcinomaSW1990CRISPER Cas9 mediated knockdown of PAF1 and RT2 profiler PCR array followed by qRT-PCRDown32781084
PAF125459STAT5B11367Gene-Gene InteractionSP assayPancreatic CancerAdenocarcinomaSW1990CRISPER Cas9 mediated knockdown of PAF1 and RT2 profiler PCR array followed by qRT-PCRDown32781084
PAF125459STAT611368Gene-Gene InteractionSP assayPancreatic CancerAdenocarcinomaSW1990CRISPER Cas9 mediated knockdown of PAF1 and RT2 profiler PCR array followed by qRT-PCRDown32781084
HOXA95109LIN28A15986Gene-Gene InteractionSFAPancreatic CancerAdenocarcinomaSW1990SiRNA mediated knockdown of HOXA9 followed by qRT-PCRDown28947139
HOXA95109NANOG20857Gene-Gene InteractionSFAPancreatic CancerAdenocarcinomaSW1990SiRNA mediated knockdown of HOXA9 followed by qRT-PCRDown28947139
STAT311364NANOG20857Gene-Gene InteractionNAPancreatic CancerAdenocarcinomaSW1990SiRNA mediated knockdown of STAT3 followed by qRT-PCRDown27576197
HOXA95109POU5F226367Gene-Gene InteractionSFAPancreatic CancerAdenocarcinomaSW1990SiRNA mediated knockdown of HOXA9 followed by qRT-PCRDown28947139
MIR34A31635HOTAIR33510miRNA-mRNA InteractionNAPancreatic CancerAdenocarcinomaSW1990Transfection with MIR34A mimics followed by Dual Luciferase Reporter assay and qRT-PCR Down33737813