BioProject ID: PRJEB20665

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJEB20665

Attribute	Value
SRA Study ID	ERP022836
Disease(s)	Pneumonia → Ventilator Associated Pneumonia (VAP) Control → Non Ventilator Associated Pneumonia (VAP)
Isolation Source	Supraglottic Swab; Endotracheal Aspirate; BALF; Bronchial Brush
Biome	Lower Respiratory Tract; Upper Respiratory Tract
Assay Type	Amplicon-16S
Instrument	Illumina MiSeq
Library Layout	PAIRED
Year	2017
Processed Runs	515
Variable Region
PMID	25078907
Country	Switzerland

Analyses

Taxonomic profile	Supraglottic Swab - Amplicon-16SEndotracheal Aspirate - Amplicon-16SBALF - Amplicon-16SBronchial Brush - Amplicon-16S
Discriminant analysis	Supraglottic Swab - Amplicon-16SEndotracheal Aspirate - Amplicon-16SBALF - Amplicon-16SBronchial Brush - Amplicon-16S
Microbial co-occurrence analysis	Supraglottic Swab - Amplicon-16SEndotracheal Aspirate - Amplicon-16SBALF - Amplicon-16SBronchial Brush - Amplicon-16S

Download

Biom file	Download - Amplicon-16S

Summary of runs

Total number of processed runs found in the database for this BioProject ID = 515

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