MDPD - Microbiome Database of Pulmonary Diseases

BioProject ID: PRJEB34172

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJEB34172

AttributeValue
SRA Study IDERP117039
Disease(s)Lung Cancer → Adenocarcinoma
Lung Cancer → Bronchioalveolar Carcinoma
Lung Cancer → Squamous Cell Carcinoma
Lung Cancer → Adenosquamous Carcinoma
Lung Cancer → Adenocarcinoma: Mixed Features
Lung Cancer → Non Small Cell Lung Cancer (NSCLC)
Isolation SourceBALF
Body siteLower Respiratory Tract
Assay TypeAmplicon-16S
InstrumentIllumina MiSeq
Library LayoutPAIRED
Year2020
Processed Runs46
Variable Region
PMID
CountryUSA

Analyses

Taxonomic profile
Discriminant analysis
Multivariate association analysis
Microbial co-occurrence analysis

Download

Biom file

Summary of runs

Total number of processed runs found in the database for this BioProject ID = 46

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