BioProject ID: PRJNA241408

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA241408

Attribute	Value
SRA Study ID	SRP040237
Disease(s)	Chronic Obstructive Pulmonary Disease (COPD) → COPD Control → Non COPD
Isolation Source	Sputum; BALF; Oral Wash
Biome	Lower Respiratory Tract; Oral
Assay Type	Amplicon-ITS
Instrument	Ion Torrent PGM
Library Layout	SINGLE
Year	2015
Processed Runs	459
Variable Region	ITS1-ITS2
PMID	25603113
Country	USA

Analyses

Taxonomic profile	Sputum - Amplicon-ITSBALF - Amplicon-ITSOral Wash - Amplicon-ITS
Discriminant analysis	Sputum - Amplicon-ITSBALF - Amplicon-ITSOral Wash - Amplicon-ITS
Multivariate association analysis	Sputum - Amplicon-ITSBALF - Amplicon-ITSOral Wash - Amplicon-ITS
Microbial co-occurrence analysis	Sputum - Amplicon-ITSBALF - Amplicon-ITSOral Wash - Amplicon-ITS

Download

Biom file	Download - Amplicon-ITS

Summary of runs

Total number of processed runs found in the database for this BioProject ID = 459

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