MDPD - Microbiome Database of Pulmonary Diseases

BioProject ID: PRJNA316588

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA316588

AttributeValue
SRA Study IDSRP311710
Disease(s)Chronic Obstructive Pulmonary Disease (COPD) → COPD
Cystic Fibrosis → Cystic Fibrosis
Healthy → Healthy Smoker
Healthy → Healthy Non Smoker
Isolation SourceSputum
Body siteLower Respiratory Tract
Assay TypeWMS
InstrumentIllumina HiSeq 2000
Library LayoutPAIRED
Year2016
Processed Runs13
Variable Region
PMID28187782
CountrySwitzerland

Analyses

Taxonomic profile
Discriminant analysis
Multivariate association analysis
Microbial co-occurrence analysis

Download

Biom file

Summary of runs

Total number of processed runs found in the database for this BioProject ID = 13

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