MDPD - Microbiome Database of Pulmonary Diseases

BioProject ID: PRJNA351934

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA351934

AttributeValue
SRA Study IDSRP092385
Disease(s)Chronic Obstructive Pulmonary Disease (COPD) → Biomass Exoposure COPD
Chronic Obstructive Pulmonary Disease (COPD) → Tobacco Smoke Exopsure COPD
Healthy → Healthy Smoker
Healthy → Healthy Non Smoker
Isolation SourceNasal Swab; Oral Wash
BiomeNasal; Oral
Assay TypeAmplicon-16S
InstrumentIllumina HiSeq 2000
Library LayoutPAIRED
Year2016
Processed Runs61
Variable RegionV4
PMID33598807
CountryIndia

Analyses

Taxonomic profile
Discriminant analysis
Multivariate association analysis
Microbial co-occurrence analysis

Download

Biom file

Summary of runs

Total number of processed runs found in the database for this BioProject ID = 61

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