MDPD - Microbiome Database of Pulmonary Diseases

BioProject ID: PRJNA445982

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA445982

AttributeValue
SRA Study IDSRP139675
Disease(s)Pneumonia → Community Acquired Pneumonia (CAP)
Pneumonia → Pneumonia Indeterminate
Pneumonia → Hospital Acquired Pneumonia (HAP)
Pneumonia → Ventilator Associated Pneumonia (VAP)
Control → Pneumonia Negative
Isolation SourceBALF; Endotracheal Aspirate
BiomeLower Respiratory Tract
Assay TypeWMS
InstrumentIllumina HiSeq 4000
Library LayoutPAIRED
Year2018
Processed Runs101
Variable Region
PMID30652494
CountryUSA

Analyses

Taxonomic profile
Discriminant analysis
Microbial co-occurrence analysis

Download

Biom file

Summary of runs

Total number of processed runs found in the database for this BioProject ID = 101

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