MDPD - Microbiome Database of Pulmonary Diseases

BioProject ID: PRJNA554461

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA554461

AttributeValue
SRA Study IDSRP214694
Disease(s)Pneumonia → Culture Positive Pneumonia
Pneumonia → Culture Negative Pneumonia
Control → Control
Isolation SourceEndotracheal Aspirate
Body siteLower Respiratory Tract
Assay TypeAmplicon-16S
InstrumentIllumina MiSeq
Library LayoutPAIRED
Year2020
Processed Runs46
Variable RegionV4
PMID31775777
CountryUSA

Analyses

Taxonomic profile
Discriminant analysis
Multivariate association analysis
Microbial co-occurrence analysis

Download

Biom file

Summary of runs

Total number of processed runs found in the database for this BioProject ID = 46

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