MDPD - Microbiome Database of Pulmonary Diseases
Attribute | Value |
---|---|
SRA Study ID | DRP008773 |
Disease(s) | COVID-19 → COVID-19 Critical COVID-19 → COVID-19 Non Critical |
Isolation Source | Stool |
Biome | Gut |
Assay Type | Amplicon-16S |
Instrument | Illumina MiSeq |
Library Layout | PAIRED |
Year | 2022 |
Processed Runs | 10 |
Variable Region | |
PMID | 38505560 ![]() |
Country | Japan |
Taxonomic profile | |
---|---|
Discriminant analysis | |
Microbial co-occurrence analysis |
Biom file |
---|
Total number of processed runs found in the database for this BioProject ID = 10
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Run ID | BioProject ID | Disease | Disease Sub-group | Biome | Instrument | Assay Type | Library Layout | Processed Reads (%) | Country | Year |
---|---|---|---|---|---|---|---|---|---|---|
DRR394970 ![]() | PRJDB13936 ![]() | COVID-19 | COVID-19 Non Critical | Gut | Illumina MiSeq | Amplicon-16S | PAIRED | 45 | Japan | 2022 |
DRR394971 ![]() | PRJDB13936 ![]() | COVID-19 | COVID-19 Non Critical | Gut | Illumina MiSeq | Amplicon-16S | PAIRED | 35 | Japan | 2022 |
DRR394972 ![]() | PRJDB13936 ![]() | COVID-19 | COVID-19 Non Critical | Gut | Illumina MiSeq | Amplicon-16S | PAIRED | 30 | Japan | 2022 |
DRR394973 ![]() | PRJDB13936 ![]() | COVID-19 | COVID-19 Critical | Gut | Illumina MiSeq | Amplicon-16S | PAIRED | 40 | Japan | 2022 |
DRR394974 ![]() | PRJDB13936 ![]() | COVID-19 | COVID-19 Critical | Gut | Illumina MiSeq | Amplicon-16S | PAIRED | 21 | Japan | 2022 |
DRR394975 ![]() | PRJDB13936 ![]() | COVID-19 | COVID-19 Critical | Gut | Illumina MiSeq | Amplicon-16S | PAIRED | 31 | Japan | 2022 |
DRR394976 ![]() | PRJDB13936 ![]() | COVID-19 | COVID-19 Critical | Gut | Illumina MiSeq | Amplicon-16S | PAIRED | 34 | Japan | 2022 |
DRR394977 ![]() | PRJDB13936 ![]() | COVID-19 | COVID-19 Critical | Gut | Illumina MiSeq | Amplicon-16S | PAIRED | 33 | Japan | 2022 |
DRR394978 ![]() | PRJDB13936 ![]() | COVID-19 | COVID-19 Non Critical | Gut | Illumina MiSeq | Amplicon-16S | PAIRED | 31 | Japan | 2022 |
DRR394979 ![]() | PRJDB13936 ![]() | COVID-19 | COVID-19 Non Critical | Gut | Illumina MiSeq | Amplicon-16S | PAIRED | 31 | Japan | 2022 |
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