BioProject ID: PRJEB31078
https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJEB31078 
| Attribute | Value |
|---|---|
| SRA Study ID | ERP113590 |
| Disease(s) | Asthma → Asthma |
| Isolation Source | Bronchial Wash; Sputum; Bronchial Brush; BALF; Oral Wash |
| Biome | Lower Respiratory Tract; Oral |
| Assay Type | Amplicon-ITS |
| Instrument | Illumina MiSeq |
| Library Layout | SINGLE |
| Year | 2020 |
| Processed Runs | 160 |
| Variable Region | ITS2 |
| PMID | 32808353 |
| Country | United Kingdom |
Analyses
| Taxonomic profile | |
|---|---|
| Discriminant analysis | |
| Multivariate association analysis | |
| Microbial co-occurrence analysis |
Download
| Biom file |
|---|
Summary of runs
Total number of processed runs found in the database for this BioProject ID = 160
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| Run ID | BioProject ID | Disease | Disease Sub-group | Biome | Instrument | Assay Type | Library Layout | Processed Reads (%) | Country | Year |
|---|---|---|---|---|---|---|---|---|---|---|
| ERR3157505 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.8 | United Kingdom | 2020 |
| ERR3157506 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 98.9 | United Kingdom | 2020 |
| ERR3157507 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 98.46 | United Kingdom | 2020 |
| ERR3157508 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.43 | United Kingdom | 2020 |
| ERR3157509 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.53 | United Kingdom | 2020 |
| ERR3157510 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.41 | United Kingdom | 2020 |
| ERR3157511 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 96.65 | United Kingdom | 2020 |
| ERR3157512 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.85 | United Kingdom | 2020 |
| ERR3157513 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.78 | United Kingdom | 2020 |
| ERR3157514 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.02 | United Kingdom | 2020 |
| ERR3157515 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.88 | United Kingdom | 2020 |
| ERR3157516 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.55 | United Kingdom | 2020 |
| ERR3157517 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.64 | United Kingdom | 2020 |
| ERR3157518 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.8 | United Kingdom | 2020 |
| ERR3157519 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 98.71 | United Kingdom | 2020 |
| ERR3157520 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.75 | United Kingdom | 2020 |
| ERR3157521 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.75 | United Kingdom | 2020 |
| ERR3157522 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.87 | United Kingdom | 2020 |
| ERR3157523 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.78 | United Kingdom | 2020 |
| ERR3157524 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.71 | United Kingdom | 2020 |
| ERR3157525 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.83 | United Kingdom | 2020 |
| ERR3157526 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.6 | United Kingdom | 2020 |
| ERR3157527 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.88 | United Kingdom | 2020 |
| ERR3157528 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.52 | United Kingdom | 2020 |
| ERR3157529 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.86 | United Kingdom | 2020 |
| ERR3157530 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.83 | United Kingdom | 2020 |
| ERR3157531 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.78 | United Kingdom | 2020 |
| ERR3157532 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.81 | United Kingdom | 2020 |
| ERR3157533 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.08 | United Kingdom | 2020 |
| ERR3157534 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.67 | United Kingdom | 2020 |
| ERR3157535 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.46 | United Kingdom | 2020 |
| ERR3157536 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.9 | United Kingdom | 2020 |
| ERR3157537 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.59 | United Kingdom | 2020 |
| ERR3157538 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.83 | United Kingdom | 2020 |
| ERR3157539 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.81 | United Kingdom | 2020 |
| ERR3157540 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.64 | United Kingdom | 2020 |
| ERR3157541 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.32 | United Kingdom | 2020 |
| ERR3157542 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.77 | United Kingdom | 2020 |
| ERR3157543 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.73 | United Kingdom | 2020 |
| ERR3157544 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.59 | United Kingdom | 2020 |
| ERR3157545 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.52 | United Kingdom | 2020 |
| ERR3157546 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.75 | United Kingdom | 2020 |
| ERR3157547 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.78 | United Kingdom | 2020 |
| ERR3157548 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.43 | United Kingdom | 2020 |
| ERR3157549 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.75 | United Kingdom | 2020 |
| ERR3157550 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.28 | United Kingdom | 2020 |
| ERR3157551 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.62 | United Kingdom | 2020 |
| ERR3157552 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.69 | United Kingdom | 2020 |
| ERR3157553 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.76 | United Kingdom | 2020 |
| ERR3157554 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.74 | United Kingdom | 2020 |
| ERR3157555 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.7 | United Kingdom | 2020 |
| ERR3157556 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.85 | United Kingdom | 2020 |
| ERR3157557 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.89 | United Kingdom | 2020 |
| ERR3157558 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.79 | United Kingdom | 2020 |
| ERR3157559 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.74 | United Kingdom | 2020 |
| ERR3157560 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.54 | United Kingdom | 2020 |
| ERR3157561 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.47 | United Kingdom | 2020 |
| ERR3157562 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.52 | United Kingdom | 2020 |
| ERR3157563 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.85 | United Kingdom | 2020 |
| ERR3157564 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.79 | United Kingdom | 2020 |
| ERR3157565 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.83 | United Kingdom | 2020 |
| ERR3157566 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.04 | United Kingdom | 2020 |
| ERR3157567 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.18 | United Kingdom | 2020 |
| ERR3157568 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.72 | United Kingdom | 2020 |
| ERR3157569 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.87 | United Kingdom | 2020 |
| ERR3157570 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.82 | United Kingdom | 2020 |
| ERR3157571 | PRJEB31078 | Asthma | Asthma | Oral | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.34 | United Kingdom | 2020 |
| ERR3157572 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.77 | United Kingdom | 2020 |
| ERR3157573 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.68 | United Kingdom | 2020 |
| ERR3157574 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.78 | United Kingdom | 2020 |
| ERR3157575 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.82 | United Kingdom | 2020 |
| ERR3157576 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.78 | United Kingdom | 2020 |
| ERR3157577 | PRJEB31078 | Asthma | Asthma | Oral | Illumina MiSeq | Amplicon-ITS | SINGLE | 98.08 | United Kingdom | 2020 |
| ERR3157578 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.85 | United Kingdom | 2020 |
| ERR3157579 | PRJEB31078 | Asthma | Asthma | Oral | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.73 | United Kingdom | 2020 |
| ERR3157580 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.29 | United Kingdom | 2020 |
| ERR3157581 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.95 | United Kingdom | 2020 |
| ERR3157582 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.83 | United Kingdom | 2020 |
| ERR3157583 | PRJEB31078 | Asthma | Asthma | Oral | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.74 | United Kingdom | 2020 |
| ERR3157584 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.68 | United Kingdom | 2020 |
| ERR3157585 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.83 | United Kingdom | 2020 |
| ERR3157586 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.89 | United Kingdom | 2020 |
| ERR3157587 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.77 | United Kingdom | 2020 |
| ERR3157588 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.83 | United Kingdom | 2020 |
| ERR3157589 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.67 | United Kingdom | 2020 |
| ERR3157590 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.74 | United Kingdom | 2020 |
| ERR3157591 | PRJEB31078 | Asthma | Asthma | Oral | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.37 | United Kingdom | 2020 |
| ERR3157592 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.54 | United Kingdom | 2020 |
| ERR3157593 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.77 | United Kingdom | 2020 |
| ERR3157594 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.77 | United Kingdom | 2020 |
| ERR3157595 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.8 | United Kingdom | 2020 |
| ERR3157596 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.77 | United Kingdom | 2020 |
| ERR3157597 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 92.14 | United Kingdom | 2020 |
| ERR3157598 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.61 | United Kingdom | 2020 |
| ERR3157599 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 98.78 | United Kingdom | 2020 |
| ERR3157600 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.71 | United Kingdom | 2020 |
| ERR3157601 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.76 | United Kingdom | 2020 |
| ERR3157602 | PRJEB31078 | Asthma | Asthma | Oral | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.76 | United Kingdom | 2020 |
| ERR3157603 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.77 | United Kingdom | 2020 |
| ERR3157604 | PRJEB31078 | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | Amplicon-ITS | SINGLE | 99.56 | United Kingdom | 2020 |
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