MDPD - Microbiome Database of Pulmonary Diseases
Attribute | Value |
---|---|
SRA Study ID | ERP132191 |
Disease(s) | Asthma → Asthma |
Isolation Source | Sputum |
Biome | Lower Respiratory Tract |
Assay Type | WMS |
Instrument | Illumina MiSeq |
Library Layout | PAIRED |
Year | 2022 |
Processed Runs | 24 |
Variable Region | |
PMID | |
Country | United Kingdom |
Taxonomic profile | |
---|---|
Discriminant analysis | |
Microbial co-occurrence analysis |
Biom file |
---|
Total number of processed runs found in the database for this BioProject ID = 24
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Run ID | BioProject ID | Disease | Disease Sub-group | Biome | Instrument | Assay Type | Library Layout | Processed Reads (%) | Country | Year |
---|---|---|---|---|---|---|---|---|---|---|
ERR10033399 ![]() | PRJEB47876 ![]() | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | WMS | PAIRED | 40.7 | United Kingdom | 2022 |
ERR10033400 ![]() | PRJEB47876 ![]() | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | WMS | PAIRED | 36.2 | United Kingdom | 2022 |
ERR10033401 ![]() | PRJEB47876 ![]() | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | WMS | PAIRED | 75.8 | United Kingdom | 2022 |
ERR10033402 ![]() | PRJEB47876 ![]() | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | WMS | PAIRED | 38 | United Kingdom | 2022 |
ERR10033403 ![]() | PRJEB47876 ![]() | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | WMS | PAIRED | 15.1 | United Kingdom | 2022 |
ERR10033404 ![]() | PRJEB47876 ![]() | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | WMS | PAIRED | 57.3 | United Kingdom | 2022 |
ERR10033405 ![]() | PRJEB47876 ![]() | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | WMS | PAIRED | 72.6 | United Kingdom | 2022 |
ERR10033406 ![]() | PRJEB47876 ![]() | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | WMS | PAIRED | 29.4 | United Kingdom | 2022 |
ERR10033407 ![]() | PRJEB47876 ![]() | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | WMS | PAIRED | 18.5 | United Kingdom | 2022 |
ERR10033408 ![]() | PRJEB47876 ![]() | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | WMS | PAIRED | 40.4 | United Kingdom | 2022 |
ERR10033409 ![]() | PRJEB47876 ![]() | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | WMS | PAIRED | 22.6 | United Kingdom | 2022 |
ERR10033410 ![]() | PRJEB47876 ![]() | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | WMS | PAIRED | 23.8 | United Kingdom | 2022 |
ERR10033411 ![]() | PRJEB47876 ![]() | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | WMS | PAIRED | 51.3 | United Kingdom | 2022 |
ERR10033412 ![]() | PRJEB47876 ![]() | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | WMS | PAIRED | 9.5 | United Kingdom | 2022 |
ERR10033413 ![]() | PRJEB47876 ![]() | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | WMS | PAIRED | 89.6 | United Kingdom | 2022 |
ERR10033414 ![]() | PRJEB47876 ![]() | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | WMS | PAIRED | 59.3 | United Kingdom | 2022 |
ERR10033415 ![]() | PRJEB47876 ![]() | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | WMS | PAIRED | 83.1 | United Kingdom | 2022 |
ERR10033416 ![]() | PRJEB47876 ![]() | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | WMS | PAIRED | 60.1 | United Kingdom | 2022 |
ERR10033417 ![]() | PRJEB47876 ![]() | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | WMS | PAIRED | 21.8 | United Kingdom | 2022 |
ERR10033418 ![]() | PRJEB47876 ![]() | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | WMS | PAIRED | 13.3 | United Kingdom | 2022 |
ERR10033419 ![]() | PRJEB47876 ![]() | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | WMS | PAIRED | 24.3 | United Kingdom | 2022 |
ERR10033420 ![]() | PRJEB47876 ![]() | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | WMS | PAIRED | 9.71 | United Kingdom | 2022 |
ERR10033421 ![]() | PRJEB47876 ![]() | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | WMS | PAIRED | 75.8 | United Kingdom | 2022 |
ERR10033422 ![]() | PRJEB47876 ![]() | Asthma | Asthma | Lower Respiratory Tract | Illumina MiSeq | WMS | PAIRED | 97.3 | United Kingdom | 2022 |
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