MDPD - Microbiome Database of Pulmonary Diseases

BioProject ID: PRJEB47876

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJEB47876

AttributeValue
SRA Study IDERP132191
Disease(s)Asthma → Asthma
Isolation SourceSputum
BiomeLower Respiratory Tract
Assay TypeWMS
InstrumentIllumina MiSeq
Library LayoutPAIRED
Year2022
Processed Runs24
Variable Region
PMID
CountryUnited Kingdom

Analyses

Taxonomic profile
Discriminant analysis
Microbial co-occurrence analysis

Download

Biom file

Summary of runs

Total number of processed runs found in the database for this BioProject ID = 24

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Run IDBioProject IDDiseaseDisease Sub-groupBiomeInstrumentAssay TypeLibrary LayoutProcessed Reads (%)CountryYear
ERR10033399 PRJEB47876 AsthmaAsthmaLower Respiratory TractIllumina MiSeqWMSPAIRED40.7United Kingdom2022
ERR10033400 PRJEB47876 AsthmaAsthmaLower Respiratory TractIllumina MiSeqWMSPAIRED36.2United Kingdom2022
ERR10033401 PRJEB47876 AsthmaAsthmaLower Respiratory TractIllumina MiSeqWMSPAIRED75.8United Kingdom2022
ERR10033402 PRJEB47876 AsthmaAsthmaLower Respiratory TractIllumina MiSeqWMSPAIRED38United Kingdom2022
ERR10033403 PRJEB47876 AsthmaAsthmaLower Respiratory TractIllumina MiSeqWMSPAIRED15.1United Kingdom2022
ERR10033404 PRJEB47876 AsthmaAsthmaLower Respiratory TractIllumina MiSeqWMSPAIRED57.3United Kingdom2022
ERR10033405 PRJEB47876 AsthmaAsthmaLower Respiratory TractIllumina MiSeqWMSPAIRED72.6United Kingdom2022
ERR10033406 PRJEB47876 AsthmaAsthmaLower Respiratory TractIllumina MiSeqWMSPAIRED29.4United Kingdom2022
ERR10033407 PRJEB47876 AsthmaAsthmaLower Respiratory TractIllumina MiSeqWMSPAIRED18.5United Kingdom2022
ERR10033408 PRJEB47876 AsthmaAsthmaLower Respiratory TractIllumina MiSeqWMSPAIRED40.4United Kingdom2022
ERR10033409 PRJEB47876 AsthmaAsthmaLower Respiratory TractIllumina MiSeqWMSPAIRED22.6United Kingdom2022
ERR10033410 PRJEB47876 AsthmaAsthmaLower Respiratory TractIllumina MiSeqWMSPAIRED23.8United Kingdom2022
ERR10033411 PRJEB47876 AsthmaAsthmaLower Respiratory TractIllumina MiSeqWMSPAIRED51.3United Kingdom2022
ERR10033412 PRJEB47876 AsthmaAsthmaLower Respiratory TractIllumina MiSeqWMSPAIRED9.5United Kingdom2022
ERR10033413 PRJEB47876 AsthmaAsthmaLower Respiratory TractIllumina MiSeqWMSPAIRED89.6United Kingdom2022
ERR10033414 PRJEB47876 AsthmaAsthmaLower Respiratory TractIllumina MiSeqWMSPAIRED59.3United Kingdom2022
ERR10033415 PRJEB47876 AsthmaAsthmaLower Respiratory TractIllumina MiSeqWMSPAIRED83.1United Kingdom2022
ERR10033416 PRJEB47876 AsthmaAsthmaLower Respiratory TractIllumina MiSeqWMSPAIRED60.1United Kingdom2022
ERR10033417 PRJEB47876 AsthmaAsthmaLower Respiratory TractIllumina MiSeqWMSPAIRED21.8United Kingdom2022
ERR10033418 PRJEB47876 AsthmaAsthmaLower Respiratory TractIllumina MiSeqWMSPAIRED13.3United Kingdom2022
ERR10033419 PRJEB47876 AsthmaAsthmaLower Respiratory TractIllumina MiSeqWMSPAIRED24.3United Kingdom2022
ERR10033420 PRJEB47876 AsthmaAsthmaLower Respiratory TractIllumina MiSeqWMSPAIRED9.71United Kingdom2022
ERR10033421 PRJEB47876 AsthmaAsthmaLower Respiratory TractIllumina MiSeqWMSPAIRED75.8United Kingdom2022
ERR10033422 PRJEB47876 AsthmaAsthmaLower Respiratory TractIllumina MiSeqWMSPAIRED97.3United Kingdom2022
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