MDPD - Microbiome Database of Pulmonary Diseases

Run ID: SRR14355516

https://www.ncbi.nlm.nih.gov/sra/?term=SRR14355516

AttributeValue
Experiment IDSRX10709299
BioSample IDSAMN18920958
BioProject IDPRJNA726058
Number of Bases22631405
Number of Bytes11534449
CountryUganda
Assay TypeAmplicon-16S
BiomeLower Respiratory Tract
Isolation SourceSputum
Library LayoutPAIRED
Variable RegionV3-V4
InstrumentIllumina MiSeq
Year2023
DiseaseChronic Obstructive Pulmonary Disease (COPD)
Disease Sub-groupCOPD GOLD 1
GenderMale
Age55.23
Smoking Status
TherapeuticsSeptrin
ComorbidityHIV positive
Processed Reads (%)30

A. Taxonomic composition of the run (Krona plot)

B. Top 10 abundant taxa (Bar plot)



© 2025 Bose Institute. All rights reserved. For queries, please contact Dr. Sudipto Saha (ssaha4@jcbose.ac.in, ssaha4@gmail.com).