MDPD - Microbiome Database of Pulmonary Diseases

Run ID: SRR14355522

https://www.ncbi.nlm.nih.gov/sra/?term=SRR14355522

AttributeValue
Experiment IDSRX10709293
BioSample IDSAMN18920979
BioProject IDPRJNA726058
Number of Bases13420235
Number of Bytes7421177
CountryUganda
Assay TypeAmplicon-16S
BiomeLower Respiratory Tract
Isolation SourceSputum
Library LayoutPAIRED
Variable RegionV3-V4
InstrumentIllumina MiSeq
Year2023
DiseaseChronic Obstructive Pulmonary Disease (COPD)
Disease Sub-groupCOPD GOLD 2
GenderFemale
Age50.72
Smoking Status
Therapeutics
ComorbidityHIV positive
Processed Reads (%)33

A. Taxonomic composition of the run (Krona plot)

B. Top 10 abundant taxa (Bar plot)



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