MDPD - Microbiome Database of Pulmonary Diseases

Run ID: SRR14355525

https://www.ncbi.nlm.nih.gov/sra/?term=SRR14355525

AttributeValue
Experiment IDSRX10709290
BioSample IDSAMN18920976
BioProject IDPRJNA726058
Number of Bases15772894
Number of Bytes8038691
CountryUganda
Assay TypeAmplicon-16S
BiomeLower Respiratory Tract
Isolation SourceSputum
Library LayoutPAIRED
Variable RegionV3-V4
InstrumentIllumina MiSeq
Year2023
DiseaseChronic Obstructive Pulmonary Disease (COPD)
Disease Sub-groupCOPD GOLD 1
GenderFemale
Age48.13
Smoking Status
TherapeuticsSeptrin
ComorbidityHIV positive
Processed Reads (%)41

A. Taxonomic composition of the run (Krona plot)

B. Top 10 abundant taxa (Bar plot)



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