MDPD - Microbiome Database of Pulmonary Diseases

Run ID: SRR20642796

https://www.ncbi.nlm.nih.gov/sra/?term=SRR20642796

AttributeValue
Experiment IDSRX16666059
BioSample IDSAMN29924005
BioProject IDPRJNA861712
Number of Bases56592500
Number of Bytes18682288
CountryChina
Assay TypeAmplicon-16S
BiomeLower Respiratory Tract
Isolation SourceSputum
Library LayoutPAIRED
Variable RegionV3-V4
InstrumentIllumina HiSeq 2500
Year2022
DiseaseChronic Obstructive Pulmonary Disease (COPD)
Disease Sub-groupCOPD Exacerbation
Gender
Age
Smoking Status
Therapeutics
Comorbidity
Processed Reads (%)41

A. Taxonomic composition of the run (Krona plot)

B. Top 10 abundant taxa (Bar plot)



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