BioProject - MDPD

BioProject ID: PRJNA861712

https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA861712

Attribute	Value
SRA Study ID	SRP388064
Disease(s)	Chronic Obstructive Pulmonary Disease (COPD) → COPD Chronic Obstructive Pulmonary Disease (COPD) → COPD Stable Chronic Obstructive Pulmonary Disease (COPD) → COPD Exacerbation Chronic Obstructive Pulmonary Disease (COPD) → COPD Post Therapy
Isolation Source	Sputum
Biome	Lower Respiratory Tract
Assay Type	Amplicon-16S
Instrument	Illumina HiSeq 2500
Library Layout	PAIRED
Year	2022
Processed Runs	100
Variable Region	V3-V4
PMID	37029178
Country	China

Analyses

Taxonomic profile
Discriminant analysis
Microbial co-occurrence analysis

Download

Biom file

Summary of runs

Total number of processed runs found in the database for this BioProject ID = 100

Go to Page:

Page 1 / 1

Run ID	BioProject ID	Disease	Disease Sub-group	Biome	Instrument	Assay Type	Library Layout	Processed Reads (%)	Country	Year
SRR20642790	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	33	China	2022
SRR20642791	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	25	China	2022
SRR20642792	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	18	China	2022
SRR20642793	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	21	China	2022
SRR20642794	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	27	China	2022
SRR20642795	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	31	China	2022
SRR20642796	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Exacerbation	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	41	China	2022
SRR20642797	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	27	China	2022
SRR20642798	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	17	China	2022
SRR20642799	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	23	China	2022
SRR20642800	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	25	China	2022
SRR20642801	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	34	China	2022
SRR20642802	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	21	China	2022
SRR20642803	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	20	China	2022
SRR20642804	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	16	China	2022
SRR20642805	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	14	China	2022
SRR20642806	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Stable	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	14	China	2022
SRR20642807	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Exacerbation	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	27	China	2022
SRR20642808	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Stable	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	9	China	2022
SRR20642809	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Stable	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	16	China	2022
SRR20642810	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Stable	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	19	China	2022
SRR20642811	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Stable	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	26	China	2022
SRR20642812	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Stable	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	27	China	2022
SRR20642813	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Stable	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	30	China	2022
SRR20642814	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Stable	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	14	China	2022
SRR20642815	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Stable	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	21	China	2022
SRR20642816	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Stable	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	17	China	2022
SRR20642817	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Stable	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	19	China	2022
SRR20642818	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Exacerbation	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	57	China	2022
SRR20642819	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Stable	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	29	China	2022
SRR20642820	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Stable	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	15	China	2022
SRR20642821	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Stable	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	20	China	2022
SRR20642822	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Stable	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	29	China	2022
SRR20642823	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Stable	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	15	China	2022
SRR20642824	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Stable	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	12	China	2022
SRR20642825	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Post Therapy	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	25	China	2022
SRR20642826	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Post Therapy	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	25	China	2022
SRR20642827	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Post Therapy	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	26	China	2022
SRR20642828	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Post Therapy	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	34	China	2022
SRR20642829	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Exacerbation	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	25	China	2022
SRR20642830	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Post Therapy	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	33	China	2022
SRR20642831	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Post Therapy	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	37	China	2022
SRR20642832	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Post Therapy	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	33	China	2022
SRR20642833	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Post Therapy	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	28	China	2022
SRR20642834	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Post Therapy	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	34	China	2022
SRR20642835	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Post Therapy	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	18	China	2022
SRR20642836	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Post Therapy	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	21	China	2022
SRR20642837	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Post Therapy	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	40	China	2022
SRR20642838	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Post Therapy	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	36	China	2022
SRR20642839	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Post Therapy	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	28	China	2022
SRR20642840	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Exacerbation	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	43	China	2022
SRR20642841	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Post Therapy	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	25	China	2022
SRR20642842	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Post Therapy	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	28	China	2022
SRR20642843	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Post Therapy	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	27	China	2022
SRR20642844	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Post Therapy	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	25	China	2022
SRR20642845	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Post Therapy	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	50	China	2022
SRR20642846	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Post Therapy	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	19	China	2022
SRR20642847	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Post Therapy	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	25	China	2022
SRR20642848	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Post Therapy	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	36	China	2022
SRR20642849	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Post Therapy	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	28	China	2022
SRR20642850	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Post Therapy	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	26	China	2022
SRR20642851	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Exacerbation	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	27	China	2022
SRR20642852	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Post Therapy	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	26	China	2022
SRR20642853	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Post Therapy	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	47	China	2022
SRR20642854	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Post Therapy	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	20	China	2022
SRR20642855	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Post Therapy	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	30	China	2022
SRR20642856	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Post Therapy	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	26	China	2022
SRR20642857	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Post Therapy	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	35	China	2022
SRR20642858	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Post Therapy	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	26	China	2022
SRR20642859	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Post Therapy	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	27	China	2022
SRR20642860	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Post Therapy	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	26	China	2022
SRR20642861	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Exacerbation	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	32	China	2022
SRR20642862	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	42	China	2022
SRR20642863	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	19	China	2022
SRR20642864	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	37	China	2022
SRR20642865	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	21	China	2022
SRR20642866	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Exacerbation	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	32	China	2022
SRR20642867	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Exacerbation	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	47	China	2022
SRR20642868	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Exacerbation	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	29	China	2022
SRR20642869	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Exacerbation	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	25	China	2022
SRR20642870	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Exacerbation	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	37	China	2022
SRR20642871	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Exacerbation	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	23	China	2022
SRR20642872	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Exacerbation	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	28	China	2022
SRR20642873	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Exacerbation	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	13	China	2022
SRR20642874	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Exacerbation	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	24	China	2022
SRR20642875	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Exacerbation	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	23	China	2022
SRR20642876	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Exacerbation	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	20	China	2022
SRR20642877	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Exacerbation	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	44	China	2022
SRR20642878	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Exacerbation	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	21	China	2022
SRR20642879	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Exacerbation	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	46	China	2022
SRR20642880	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Exacerbation	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	34	China	2022
SRR20642881	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Exacerbation	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	25	China	2022
SRR20642882	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Exacerbation	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	28	China	2022
SRR20642883	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Exacerbation	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	31	China	2022
SRR20642884	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Exacerbation	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	32	China	2022
SRR20642885	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Exacerbation	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	44	China	2022
SRR20642886	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Exacerbation	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	43	China	2022
SRR20642887	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Exacerbation	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	33	China	2022
SRR20642888	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Exacerbation	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	26	China	2022
SRR20642889	PRJNA861712	Chronic Obstructive Pulmonary Disease (COPD)	COPD Exacerbation	Lower Respiratory Tract	Illumina HiSeq 2500	Amplicon-16S	PAIRED	36	China	2022

Go to Page:

Page 1 / 1