MDPD - Microbiome Database of Pulmonary Diseases

Run ID: SRR20642880

https://www.ncbi.nlm.nih.gov/sra/?term=SRR20642880

AttributeValue
Experiment IDSRX16665975
BioSample IDSAMN29924013
BioProject IDPRJNA861712
Number of Bases50597500
Number of Bytes16411217
CountryChina
Assay TypeAmplicon-16S
BiomeLower Respiratory Tract
Isolation SourceSputum
Library LayoutPAIRED
Variable RegionV3-V4
InstrumentIllumina HiSeq 2500
Year2022
DiseaseChronic Obstructive Pulmonary Disease (COPD)
Disease Sub-groupCOPD Exacerbation
Gender
Age
Smoking Status
Therapeutics
Comorbidity
Processed Reads (%)34

A. Taxonomic composition of the run (Krona plot)

B. Top 10 abundant taxa (Bar plot)



© 2025 Bose Institute. All rights reserved. For queries, please contact Dr. Sudipto Saha (ssaha4@jcbose.ac.in, ssaha4@gmail.com).