MDPD - Microbiome Database of Pulmonary Diseases

Run ID: SRR20642888

https://www.ncbi.nlm.nih.gov/sra/?term=SRR20642888

AttributeValue
Experiment IDSRX16665967
BioSample IDSAMN29923997
BioProject IDPRJNA861712
Number of Bases47340000
Number of Bytes15601055
CountryChina
Assay TypeAmplicon-16S
BiomeLower Respiratory Tract
Isolation SourceSputum
Library LayoutPAIRED
Variable RegionV3-V4
InstrumentIllumina HiSeq 2500
Year2022
DiseaseChronic Obstructive Pulmonary Disease (COPD)
Disease Sub-groupCOPD Exacerbation
Gender
Age
Smoking Status
Therapeutics
Comorbidity
Processed Reads (%)26

A. Taxonomic composition of the run (Krona plot)

B. Top 10 abundant taxa (Bar plot)



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