piRNAQuest v2 other

Click on individual links to download

Download piRNAQuest V2 Annotated Sequences:
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1: Human piRNAQuest V2.fa
2: Mouse piRNAQuest V2.fa
3: Rat piRNAQuest V2.fa
4: Drosophila melanogaster piRNAQuest V2.fa
5: C. elegans piRNAQuest V2.fa
6: Zebrafish piRNAQuest V2.fa
7: Cow piRNAQuest V2.fa
8: Chicken piRNAQuest V2.fa
9: Pig piRNAQuest V2.fa
10: Dog piRNAQuest V2.fa
11: Rabbit piRNAQuest V2.fa
12: Tree Shrew piRNAQuest V2.fa
13: Platypus piRNAQuest V2.fa
14: Xenopus laevis piRNAQuest V2.fa
15: Xenopus tropicalis piRNAQuest V2.fa
16: Horse piRNAQuest V2.fa
17: Crab eating macaque piRNAQuest V2.fa
18: Rhesus piRNAQuest V2.fa
19: Marmoset piRNAQuest V2.fa
20: Sea Hare piRNAQuest V2.fa
21: Drosophila erecta piRNAQuest V2.fa
22: Drosophila yakuba piRNAQuest V2.fa
23: Drosophila virilis piRNAQuest V2.fa
24: Mosquito piRNAQuest V2.fa
25: Silkworm piRNAQuest V2.fa
26: Brown Bat piRNAQuest V2.fa
27: Chinese Hamster piRNAQuest V2.fa
28: Starlet sea anemone piRNAQuest V2.fa


 

Download piRNAQuest V2 Annotated piRNAs (bed format)
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1: Human piRNAQuest V2.bed
2: Mouse piRNAQuest V2.bed
3: Rat piRNAQuest V2.bed
4: Drosophila melanogaster piRNAQuest V2.bed
5: C. elegans piRNAQuest V2.bed
6: Zebrafish piRNAQuest V2.bed
7: Cow piRNAQuest V2.bed
8: Chicken piRNAQuest V2.bed
9: Pig piRNAQuest V2.bed
10: Dog piRNAQuest V2.bed
11: Rabbit piRNAQuest V2.bed
12: Tree Shrew piRNAQuest V2.bed
13: Platypus piRNAQuest V2.bed
14: Xenopus laevis piRNAQuest V2.bed
15: Xenopus tropicalis piRNAQuest V2.bed
16: Horse piRNAQuest V2.bed
17: Crab eating macaque piRNAQuest V2.bed
18: Rhesus piRNAQuest V2.bed
19: Marmoset piRNAQuest V2.bed
20: Sea Hare piRNAQuest V2.bed
21: Drosophila erecta piRNAQuest V2.bed
22: Drosophila yakuba piRNAQuest V2.bed
23: Drosophila virilis piRNAQuest V2.bed
24: Mosquito piRNAQuest V2.bed
25: Silkworm piRNAQuest V2.bed
26: Brown Bat piRNAQuest V2.bed
27: Chinese Hamster piRNAQuest V2.bed
28: Starlet sea anemone piRNAQuest V2.bed


 

Download Mapped piRNAQuest IDs with NCBI IDs
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1: Human piRNAs
2: Mouse piRNAs
3: Rat piRNAs
4: Drosophila melanogaster piRNAs
5: C. elegans piRNAs
6: Chinese Hamster piRNAs


 

Download piRNAQuest V2 Tissue specific piRNA expression profile among different samples:
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1: Human - tissue specific piRNA profile
2: Mouse - tissue specific piRNA profile
3: Rat - tissue specific piRNA profile
4: Drosophila melanogaster - tissue specific piRNA profile
5: C. elegans - tissue specific piRNA profile
6: Zebrafish - tissue specific piRNA profile
7: Cow - tissue specific piRNA profile
8: Chicken - tissue specific piRNA profile
9: Pig - tissue specific piRNA profile
10: Dog - tissue specific piRNA profile
11: Rabbit - tissue specific piRNA profile
12: Platypus - tissue specific piRNA profile
13: Xenopus laevis - tissue specific piRNA profile
14: Xenopus tropicalis - tissue specific piRNA profile
15: Horse - tissue specific piRNA profile
16: Crab eating macaque - tissue specific piRNA profile
17: Rhesus - tissue specific piRNA profile
18: Marmoset - tissue specific piRNA profile
19: Drosophila erecta - tissue specific piRNA profile
20: Drosophila yakuba - tissue specific piRNA profile
21: Drosophila virilis - tissue specific piRNA profile
22: Mosquito - tissue specific piRNA profile
23: Silkworm - tissue specific piRNA profile
24: Brown Bat - tissue specific piRNA profile


 

Download piRNAQuest V2 Disease specific piRNA expression profile among different samples:
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1: Cancers - piRNA profile
2: Neurodegenerative diseases - piRNA profile
3: Other diseases - piRNA profile

 

Download piRNAQuest V2 Scripts:
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1: Code for detecting piRNA Clusters
2: Code for detecting ping-pong signature